RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 DGCR2P98153 550 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 PSG4Q00888 419 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 CAV1Q03135 178 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 EGFEM1PQ0D2K5 195 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 RAB32Q13637 225 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 OR8B8Q15620 311 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 TIGD6Q17RP2 521 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 LIN52Q52LA3 116 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 TMEM200BQ69YZ2 307 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 KCTD18Q6PI47 426 aaPredicted RBP3.88□□□□□ -1.79
LIMS1-214ENST00000542845 LRRC74BQ6ZQY2 392 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 NET1Q7Z628 596 aaPredicted RBP3.88□□□□□ -1.79
LIMS1-214ENST00000542845 DPPA2Q7Z7J5 298 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 RANBP3LQ86VV4 465 aaPredicted RBP3.88□□□□□ -1.79
LIMS1-214ENST00000542845 C10orf111Q8N326 155 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 BHLHE23Q8NDY6 225 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 OR5AU1Q8NGC0 362 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 OR51G2Q8NGK0 314 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 VANGL1Q8TAA9 524 aaPredicted RBP3.88□□□□□ -1.79
LIMS1-214ENST00000542845 SLC7A13Q8TCU3 470 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 MIPOL1Q8TD10 442 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 NPRL2Q8WTW4 380 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 C10orf82Q8WW14 230 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 C17orf50Q8WW18 174 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 MOGAT1Q96PD6 335 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 TRNT1Q96Q11 434 aaKnown RBP3.88□□□□□ -1.79
LIMS1-214ENST00000542845 ZNF347Q96SE7 839 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 NAPGQ99747 312 aaPredicted RBP3.88□□□□□ -1.79
LIMS1-214ENST00000542845 SLC35A5Q9BS91 424 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 NPFFR1Q9GZQ6 430 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 FAM234AQ9H0X4 552 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 CACYBPQ9HB71 228 aaKnown RBP3.88□□□□□ -1.79
LIMS1-214ENST00000542845 SERTAD4Q9NUC0 356 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 ING3Q9NXR8 418 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 NINJ2Q9NZG7 142 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 CTSZQ9UBR2 303 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 ZNF443Q9Y2A4 671 aaPredicted RBP3.88□□□□□ -1.79
LIMS1-214ENST00000542845 STARD10Q9Y365 291 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 UTP11Q9Y3A2 253 aaKnown RBP3.88□□□□□ -1.79
LIMS1-214ENST00000542845 MAB21L2Q9Y586 359 aa3.88□□□□□ -1.79
LIMS1-214ENST00000542845 DNAH7Q8WXX0 4024 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 A0A1B0GVI7 797 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 WDR91A4D1P6 747 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 G3V2L1 256 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 H3BQF6 201 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 M0R3H8 397 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 F2RL2O00254 374 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 PLPP3O14495 311 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 DVL1O14640 695 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 CHST1O43916 411 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 LYPLA1O75608 230 aaPredicted RBP3.87□□□□□ -1.79
LIMS1-214ENST00000542845 JTBO76095 146 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 SLC2A10O95528 541 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 ABHD16AO95870 558 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 GYPAP02724 150 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 BGLAPP02818 100 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 HLA-DPB1P04440 258 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 BCHEP06276 602 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 GUSBP08236 651 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 G6PDP11413 515 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 PRPS1L1P21108 318 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 PSMB10P40306 273 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 RAB13P51153 203 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 CDONQ4KMG0 1287 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 PLA1AQ53H76 456 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 ALG10BQ5I7T1 473 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 TCTEX1D4Q5JR98 221 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 OR2T2Q6IF00 324 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 ZDHHC24Q6UX98 284 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 NHLRC1Q6VVB1 395 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 ZNF621Q6ZSS3 439 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 PXKQ7Z7A4 578 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 CENPVQ7Z7K6 275 aaPredicted RBP3.87□□□□□ -1.79
LIMS1-214ENST00000542845 LRRC34Q8IZ02 419 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 FGFRL1Q8N441 504 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 OR11L1Q8NGX0 322 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 OR6X1Q8NH79 312 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 AENQ8WTP8 325 aaKnown RBP3.87□□□□□ -1.79
LIMS1-214ENST00000542845 TWIST2Q8WVJ9 160 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 DDB2Q92466 427 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 MCHR2Q969V1 340 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 SLC25A44Q96H78 314 aaPredicted RBP3.87□□□□□ -1.79
LIMS1-214ENST00000542845 MPP4Q96JB8 637 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 SNX22Q96L94 193 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 TEX37Q96LM6 180 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 PPP1R36Q96LQ0 422 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 PPP3R2Q96LZ3 170 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 ZNF607Q96SK3 696 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 ZNF649Q9BS31 505 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 GPR61Q9BZJ8 451 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 C11orf54Q9H0W9 315 aaPredicted RBP3.87□□□□□ -1.79
LIMS1-214ENST00000542845 WNT5BQ9H1J7 359 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 MUC13Q9H3R2 512 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 ARMC7Q9H6L4 198 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 RANBP3Q9H6Z4 567 aaPredicted RBP3.87□□□□□ -1.79
LIMS1-214ENST00000542845 ZNF702PQ9H963 129 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 RAB18Q9NP72 206 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 TBC1D23Q9NUY8 699 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 PTTG3PQ9NZH4 202 aa3.87□□□□□ -1.79
LIMS1-214ENST00000542845 SELENONQ9NZV5 590 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms