RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 GRIP1Q9Y3R0 1128 aa20.02■□□□□ 0.79
HOMER3-205ENST00000542541 IGHV2OR16-5A0A0B4J2B6 119 aa20.01■□□□□ 0.79
HOMER3-205ENST00000542541 CD3EP07766 207 aa20.01■□□□□ 0.79
HOMER3-205ENST00000542541 DBHP09172 617 aa20.01■□□□□ 0.79
HOMER3-205ENST00000542541 COX6B1P14854 86 aa20.01■□□□□ 0.79
HOMER3-205ENST00000542541 PCSK6P29122 969 aa20.01■□□□□ 0.79
HOMER3-205ENST00000542541 SLC6A9P48067 706 aa20.01■□□□□ 0.79
HOMER3-205ENST00000542541 RGS6P49758 472 aa20.01■□□□□ 0.79
HOMER3-205ENST00000542541 TP53I3Q53FA7 332 aa20.01■□□□□ 0.79
HOMER3-205ENST00000542541 HAVCR2Q8TDQ0 301 aa20.01■□□□□ 0.79
HOMER3-205ENST00000542541 SGCDQ92629 289 aa20.01■□□□□ 0.79
HOMER3-205ENST00000542541 C4orf45Q96LM5 186 aa20.01■□□□□ 0.79
HOMER3-205ENST00000542541 SPTAN1Q13813 2472 aaKnown RBP20■□□□□ 0.79
HOMER3-205ENST00000542541 DOPEY2Q9Y3R5 2298 aa20■□□□□ 0.79
HOMER3-205ENST00000542541 TMEM129A0AVI4 362 aa20■□□□□ 0.79
HOMER3-205ENST00000542541 J3QLW9 94 aa20■□□□□ 0.79
HOMER3-205ENST00000542541 ABCD4O14678 606 aa20■□□□□ 0.79
HOMER3-205ENST00000542541 MYL12BO14950 172 aa20■□□□□ 0.79
HOMER3-205ENST00000542541 MAGEB4O15481 346 aaPredicted RBP20■□□□□ 0.79
HOMER3-205ENST00000542541 MT-ND5P03915 603 aa20■□□□□ 0.79
HOMER3-205ENST00000542541 ADRA2AP08913 450 aa20■□□□□ 0.79
HOMER3-205ENST00000542541 ACSM4P0C7M7 580 aa20■□□□□ 0.79
HOMER3-205ENST00000542541 ZNF19P17023 458 aa20■□□□□ 0.79
HOMER3-205ENST00000542541 OR12D2P58182 307 aa20■□□□□ 0.79
HOMER3-205ENST00000542541 ZNF829Q3KNS6 432 aaPredicted RBP20■□□□□ 0.79
HOMER3-205ENST00000542541 LIPNQ5VXI9 398 aa20■□□□□ 0.79
HOMER3-205ENST00000542541 PIAS4Q8N2W9 510 aaPredicted RBP20■□□□□ 0.79
HOMER3-205ENST00000542541 OR52N1Q8NH53 320 aa20■□□□□ 0.79
HOMER3-205ENST00000542541 C4orf36Q96KX1 117 aa20■□□□□ 0.79
HOMER3-205ENST00000542541 SIGLEC11Q96RL6 698 aa20■□□□□ 0.79
HOMER3-205ENST00000542541 CLEC2DQ9UHP7 191 aa20■□□□□ 0.79
HOMER3-205ENST00000542541 SNX5Q9Y5X3 404 aa20■□□□□ 0.79
HOMER3-205ENST00000542541 USP9YO00507 2555 aaPredicted RBP20■□□□□ 0.79
HOMER3-205ENST00000542541 PRR14LQ5THK1 2151 aa19.99■□□□□ 0.79
HOMER3-205ENST00000542541 DEFB108AA8MXU0 73 aa19.99■□□□□ 0.79
HOMER3-205ENST00000542541 ABHD16AO95870 558 aa19.99■□□□□ 0.79
HOMER3-205ENST00000542541 RAD52P43351 418 aa19.99■□□□□ 0.79
HOMER3-205ENST00000542541 CX3CR1P49238 355 aa19.99■□□□□ 0.79
HOMER3-205ENST00000542541 MRPL28Q13084 256 aaKnown RBP19.99■□□□□ 0.79
HOMER3-205ENST00000542541 NANOGP1Q8N7R0 232 aa19.99■□□□□ 0.79
HOMER3-205ENST00000542541 PIK3IP1Q96FE7 263 aa19.99■□□□□ 0.79
HOMER3-205ENST00000542541 DOK1Q99704 481 aa19.99■□□□□ 0.79
HOMER3-205ENST00000542541 MND1Q9BWT6 205 aa19.99■□□□□ 0.79
HOMER3-205ENST00000542541 TBCCD1Q9NVR7 557 aa19.99■□□□□ 0.79
HOMER3-205ENST00000542541 ADGRG4Q8IZF6 3080 aa19.99■□□□□ 0.79
HOMER3-205ENST00000542541 TMEM269A0A1B0GVZ9 245 aa19.98■□□□□ 0.79
HOMER3-205ENST00000542541 TRIM64A6NGJ6 449 aa19.98■□□□□ 0.79
HOMER3-205ENST00000542541 ACOD1A6NK06 481 aa19.98■□□□□ 0.79
HOMER3-205ENST00000542541 J3QW42 95 aa19.98■□□□□ 0.79
HOMER3-205ENST00000542541 ICMTO60725 284 aa19.98■□□□□ 0.79
HOMER3-205ENST00000542541 MT-ND2P03891 347 aa19.98■□□□□ 0.79
HOMER3-205ENST00000542541 CALCRP30988 508 aa19.98■□□□□ 0.79
HOMER3-205ENST00000542541 MMP16P51512 607 aa19.98■□□□□ 0.79
HOMER3-205ENST00000542541 PSMA6P60900 246 aaKnown RBP19.98■□□□□ 0.79
HOMER3-205ENST00000542541 SLC22A25Q6T423 547 aa19.98■□□□□ 0.79
HOMER3-205ENST00000542541 C1orf174Q8IYL3 243 aa19.98■□□□□ 0.79
HOMER3-205ENST00000542541 PAQR4Q8N4S7 273 aaPredicted RBP19.98■□□□□ 0.79
HOMER3-205ENST00000542541 RPP14O95059 124 aaKnown RBP19.98■□□□□ 0.79
HOMER3-205ENST00000542541 UCP2P55851 309 aa19.98■□□□□ 0.79
HOMER3-205ENST00000542541 IRF3Q14653 427 aa19.98■□□□□ 0.79
HOMER3-205ENST00000542541 OR2G6Q5TZ20 316 aa19.98■□□□□ 0.79
HOMER3-205ENST00000542541 ZNF544Q6NX49 715 aa19.98■□□□□ 0.79
HOMER3-205ENST00000542541 SVOPQ8N4V2 548 aa19.98■□□□□ 0.79
HOMER3-205ENST00000542541 APOBEC3DQ96AK3 386 aaPredicted RBP19.98■□□□□ 0.79
HOMER3-205ENST00000542541 COG8Q96MW5 612 aa19.98■□□□□ 0.79
HOMER3-205ENST00000542541 BCL2L14Q9BZR8 327 aa19.98■□□□□ 0.79
HOMER3-205ENST00000542541 ZNF696Q9H7X3 374 aa19.98■□□□□ 0.79
HOMER3-205ENST00000542541 ISG20L2Q9H9L3 353 aaKnown RBP19.98■□□□□ 0.79
HOMER3-205ENST00000542541 ACOXLQ9NUZ1 547 aa19.98■□□□□ 0.79
HOMER3-205ENST00000542541 RNF115Q9Y4L5 304 aa19.98■□□□□ 0.79
HOMER3-205ENST00000542541 LCATP04180 440 aa19.97■□□□□ 0.79
HOMER3-205ENST00000542541 ANXA2P07355 339 aaKnown RBP19.97■□□□□ 0.79
HOMER3-205ENST00000542541 HTR1AP08908 422 aa19.97■□□□□ 0.79
HOMER3-205ENST00000542541 NR4A1P22736 598 aa19.97■□□□□ 0.79
HOMER3-205ENST00000542541 GBX2P52951 348 aaPredicted RBP19.97■□□□□ 0.79
HOMER3-205ENST00000542541 WNT4P56705 351 aa19.97■□□□□ 0.79
HOMER3-205ENST00000542541 ZNF121P58317 390 aaPredicted RBP19.97■□□□□ 0.79
HOMER3-205ENST00000542541 SPRYD4Q8WW59 207 aaPredicted RBP19.97■□□□□ 0.79
HOMER3-205ENST00000542541 C1QTNF5Q9BXJ0 243 aa19.97■□□□□ 0.79
HOMER3-205ENST00000542541 BABAM2Q9NXR7 383 aa19.97■□□□□ 0.79
HOMER3-205ENST00000542541 PLEKHB1Q9UF11 243 aaPredicted RBP19.97■□□□□ 0.79
HOMER3-205ENST00000542541 R4GMQ9 66 aa19.97■□□□□ 0.79
HOMER3-205ENST00000542541 ICE1Q9Y2F5 2266 aa19.96■□□□□ 0.79
HOMER3-205ENST00000542541 A6NNC1 897 aa19.96■□□□□ 0.79
HOMER3-205ENST00000542541 ATP6V1G2-DDX39BF2Z307 99 aa19.96■□□□□ 0.79
HOMER3-205ENST00000542541 SIAH2O43255 324 aa19.96■□□□□ 0.79
HOMER3-205ENST00000542541 TUBG1P23258 451 aa19.96■□□□□ 0.79
HOMER3-205ENST00000542541 WNT5AP41221 380 aa19.96■□□□□ 0.79
HOMER3-205ENST00000542541 ZNF773Q6PK81 442 aa19.96■□□□□ 0.79
HOMER3-205ENST00000542541 COLCA1Q6ZS62 124 aa19.96■□□□□ 0.79
HOMER3-205ENST00000542541 NAA40Q86UY6 237 aa19.96■□□□□ 0.79
HOMER3-205ENST00000542541 OR52H1Q8NGJ2 320 aa19.96■□□□□ 0.79
HOMER3-205ENST00000542541 OR5L1Q8NGL2 311 aa19.96■□□□□ 0.79
HOMER3-205ENST00000542541 GATAD2BQ8WXI9 593 aa19.96■□□□□ 0.79
HOMER3-205ENST00000542541 PELI1Q96FA3 418 aa19.96■□□□□ 0.79
HOMER3-205ENST00000542541 MOB1AQ9H8S9 216 aa19.96■□□□□ 0.79
HOMER3-205ENST00000542541 TUBG2Q9NRH3 451 aa19.96■□□□□ 0.79
HOMER3-205ENST00000542541 POU2F3Q9UKI9 436 aa19.96■□□□□ 0.79
HOMER3-205ENST00000542541 LOC110117498-PIK3R3F6TDL0 507 aa19.95■□□□□ 0.78
HOMER3-205ENST00000542541 CDH15P55291 814 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms