RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 KCNK7Q9Y2U2 307 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 FAM186AA6NE01 2351 aa13.18□□□□□ -0.3
DDX55-209ENST00000542286 NAP1L6A6NFF2 107 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 GGT3PA6NGU5 568 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 ECDO95905 644 aaPredicted RBP13.17□□□□□ -0.3
DDX55-209ENST00000542286 APOC1P02654 83 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 CD3DP04234 171 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 LIPCP11150 499 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 H2BFSP57053 126 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 POLR2GP62487 172 aaKnown RBP eCLIP13.17□□□□□ -0.3
DDX55-209ENST00000542286 BPIFCQ8NFQ6 507 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 OR52N5Q8NH56 324 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 NARS2Q96I59 477 aaKnown RBP13.17□□□□□ -0.3
DDX55-209ENST00000542286 CMKLR1Q99788 373 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 CRB3Q9BUF7 120 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 TAS2R3Q9NYW6 316 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 AKAP7Q9P0M2 348 aaPredicted RBP13.17□□□□□ -0.3
DDX55-209ENST00000542286 NDRG3Q9UGV2 375 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 EXPH5Q8NEV8 1989 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 COL5A1P20908 1838 aaPredicted RBP13.17□□□□□ -0.3
DDX55-209ENST00000542286 LOC107986453A0A1B0GWG9 222 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 M0QYG6 137 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 AP3S2P59780 193 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 HSF1Q00613 529 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 SLC26A10Q8NG04 563 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 OR51S1Q8NGJ8 323 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 OR10K1Q8NGX5 313 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 ASB10Q8WXI3 467 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 SEC61A2Q9H9S3 476 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 PLEKHA1Q9HB21 404 aa13.17□□□□□ -0.3
DDX55-209ENST00000542286 LOC100509620A0A075B734 347 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 TMEM269A0A1B0GVZ9 245 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 ACOT7O00154 380 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 GTF2F2P13984 249 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 MEOX2P50222 304 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 MYBPHQ13203 477 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 RAB11BQ15907 218 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 TMEM88Q6PEY1 159 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 CATSPERDQ86XM0 798 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 OR13C3Q8NGS6 347 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 MAFAQ8NHW3 353 aaPredicted RBP13.16□□□□□ -0.3
DDX55-209ENST00000542286 CDV3Q9UKY7 258 aaKnown RBP13.16□□□□□ -0.3
DDX55-209ENST00000542286 SNRPGP15A8MWD9 76 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 CFIP05156 583 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 RAB40ALP0C0E4 278 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 H2AFB1P0C5Y9 115 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 ZNF823P16415 610 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 DLX5P56178 289 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 GFOD2Q3B7J2 385 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 TEX30Q5JUR7 227 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 ZNF248Q8NDW4 579 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 POC1BQ8TC44 478 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 ST7LQ8TDW4 575 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 RAB40AQ8WXH6 277 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 SPSB2Q99619 263 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 METTL7AQ9H8H3 244 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 PPP4R1LQ9P1A2 415 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 NCOA6Q14686 2063 aaPredicted RBP13.16□□□□□ -0.3
DDX55-209ENST00000542286 MYO7BQ6PIF6 2116 aa13.16□□□□□ -0.3
DDX55-209ENST00000542286 XRCC3O43542 346 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 ZNF35P13682 527 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 EPHA8P29322 1005 aaPredicted RBP13.15□□□□□ -0.3
DDX55-209ENST00000542286 RAB13P51153 203 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 SLC22A6Q4U2R8 563 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 FAM74A1Q5RGS3 127 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 ELP2Q6IA86 826 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 H1FNTQ75WM6 255 aaPredicted RBP13.15□□□□□ -0.3
DDX55-209ENST00000542286 NUP54Q7Z3B4 507 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 ACBD4Q8NC06 268 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 OR4D6Q8NGJ1 314 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 MICU1Q9BPX6 476 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 SLC25A32Q9H2D1 315 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 PTGES2Q9H7Z7 377 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 G6PC2Q9NQR9 355 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 SEMA5BQ9P283 1151 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 SIT1Q9Y3P8 196 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 ANKUB1A6NFN9 424 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 RBBP9O75884 186 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 AQP8O94778 261 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 IL5P05113 134 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 FOSL2P15408 326 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 PRKXP51817 358 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 DCDP81605 110 aaKnown RBP13.15□□□□□ -0.3
DDX55-209ENST00000542286 C17orf67Q0P5P2 114 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 HFEQ30201 348 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 HLA-BQ31612 363 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 ANKRD16Q6P6B7 361 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 OR4S1Q8NGB4 309 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 C11orf40Q8WZ69 217 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 OR5B2Q96R09 309 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 SMOC1Q9H4F8 434 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 B3GAT1Q9P2W7 334 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 OR52A1Q9UKL2 312 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 RARRES3Q9UL19 164 aa13.15□□□□□ -0.3
DDX55-209ENST00000542286 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.15□□□□□ -0.31
DDX55-209ENST00000542286 A0A1W2PPC1 479 aa13.15□□□□□ -0.31
DDX55-209ENST00000542286 PTGDSP41222 190 aa13.15□□□□□ -0.31
DDX55-209ENST00000542286 KCTD18Q6PI47 426 aaPredicted RBP13.15□□□□□ -0.31
DDX55-209ENST00000542286 OR6K3Q8NGY3 331 aa13.15□□□□□ -0.31
DDX55-209ENST00000542286 ZNF775Q96BV0 537 aaPredicted RBP13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms