RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 SDHDO14521 159 aa6.91□□□□□ -1.3
MRPS35-204ENST00000542199 SNNO75324 88 aaPredicted RBP6.91□□□□□ -1.3
MRPS35-204ENST00000542199 CPSF4O95639 269 aaKnown RBP6.91□□□□□ -1.3
MRPS35-204ENST00000542199 LY6G6DO95868 133 aa6.91□□□□□ -1.3
MRPS35-204ENST00000542199 C1QCP02747 245 aa6.91□□□□□ -1.3
MRPS35-204ENST00000542199 IGHV4-38-2P0DP08 117 aa6.91□□□□□ -1.3
MRPS35-204ENST00000542199 COX5AP20674 150 aa6.91□□□□□ -1.3
MRPS35-204ENST00000542199 EEF1B2P24534 225 aaKnown RBP6.91□□□□□ -1.3
MRPS35-204ENST00000542199 FKBP2P26885 142 aaKnown RBP6.91□□□□□ -1.3
MRPS35-204ENST00000542199 IL12AP29459 219 aa6.91□□□□□ -1.3
MRPS35-204ENST00000542199 KCNJ10P78508 379 aa6.91□□□□□ -1.3
MRPS35-204ENST00000542199 STX3Q13277 289 aa6.91□□□□□ -1.3
MRPS35-204ENST00000542199 CAPRIN1Q14444 709 aaKnown RBP6.91□□□□□ -1.3
MRPS35-204ENST00000542199 PDK3Q15120 406 aa6.91□□□□□ -1.3
MRPS35-204ENST00000542199 KLHL22Q53GT1 634 aa6.91□□□□□ -1.3
MRPS35-204ENST00000542199 CEP85LQ5SZL2 805 aa6.91□□□□□ -1.3
MRPS35-204ENST00000542199 TRAT1Q6PIZ9 186 aa6.91□□□□□ -1.3
MRPS35-204ENST00000542199 Q71RC1 249 aaPredicted RBP6.91□□□□□ -1.3
MRPS35-204ENST00000542199 BHLHA15Q7RTS1 189 aaPredicted RBP6.91□□□□□ -1.3
MRPS35-204ENST00000542199 GRINAQ7Z429 371 aa6.91□□□□□ -1.3
MRPS35-204ENST00000542199 ZNF619Q8N2I2 560 aa6.91□□□□□ -1.3
MRPS35-204ENST00000542199 SETD6Q8TBK2 473 aa6.91□□□□□ -1.3
MRPS35-204ENST00000542199 CCDC107Q8WV48 283 aa6.91□□□□□ -1.3
MRPS35-204ENST00000542199 TRNT1Q96Q11 434 aaKnown RBP6.91□□□□□ -1.3
MRPS35-204ENST00000542199 ZNF300Q96RE9 604 aaPredicted RBP6.91□□□□□ -1.3
MRPS35-204ENST00000542199 SLC35A5Q9BS91 424 aa6.91□□□□□ -1.3
MRPS35-204ENST00000542199 AIG1Q9NVV5 245 aa6.91□□□□□ -1.3
MRPS35-204ENST00000542199 MARCOQ9UEW3 520 aaPredicted RBP6.91□□□□□ -1.3
MRPS35-204ENST00000542199 CHRNA9Q9UGM1 479 aa6.91□□□□□ -1.3
MRPS35-204ENST00000542199 HDGFL3Q9Y3E1 203 aa6.91□□□□□ -1.3
MRPS35-204ENST00000542199 RNF115Q9Y4L5 304 aa6.91□□□□□ -1.3
MRPS35-204ENST00000542199 GOLGA8QA0A0J9YX86 632 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 GOLGA8OA6NCC3 632 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 DPRXA6NFQ7 191 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 C9JVG2 144 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 GOLGA8NF8WBI6 632 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 SULT2B1O00204 365 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 HDAC3O15379 428 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 LYZL6O75951 148 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 SOD3P08294 240 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 RPS4Y1P22090 263 aaKnown RBP6.9□□□□□ -1.3
MRPS35-204ENST00000542199 IGHV1-2P23083 117 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 S100A3P33764 101 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 CHI3L1P36222 383 aaPredicted RBP6.9□□□□□ -1.3
MRPS35-204ENST00000542199 CDKN2CP42773 168 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 CLK1P49759 484 aaKnown RBP6.9□□□□□ -1.3
MRPS35-204ENST00000542199 SLC18A1P54219 525 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 NME5P56597 212 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 RPS4XP62701 263 aaKnown RBP6.9□□□□□ -1.3
MRPS35-204ENST00000542199 HPCAP84074 193 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 H3F3AP84243 136 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 BSPH1Q075Z2 132 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 LRRC74AQ0VAA2 488 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 ZNF273Q14593 569 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 SYPL1Q16563 259 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 RBMS3Q6XE24 437 aaKnown RBP6.9□□□□□ -1.3
MRPS35-204ENST00000542199 LRRC74BQ6ZQY2 392 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 SSX8Q7RTT4 187 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 SPATA19Q7Z5L4 167 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 CROCCP2Q86T23 111 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 P2RY8Q86VZ1 359 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 RNF130Q86XS8 419 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 ARFGAP2Q8N6H7 521 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 TRIML2Q8N7C3 387 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 ZNF433Q8N7K0 673 aaPredicted RBP6.9□□□□□ -1.3
MRPS35-204ENST00000542199 STPG4Q8N801 248 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 ANKFN1Q8N957 763 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 ZNF383Q8NA42 475 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 ARL5BQ96KC2 179 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 UHRF2Q96PU4 802 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 INPP5KQ9BT40 448 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 SLC38A1Q9H2H9 487 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 CENPHQ9H3R5 247 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 NGBQ9NPG2 151 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 CTPS2Q9NRF8 586 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 EMC3Q9P0I2 261 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 LIPT1Q9Y234 373 aa6.9□□□□□ -1.3
MRPS35-204ENST00000542199 TMEM120BA0PK00 339 aa6.89□□□□□ -1.31
MRPS35-204ENST00000542199 OR5H1A6NKK0 313 aa6.89□□□□□ -1.31
MRPS35-204ENST00000542199 TRPC5OSA6NMA1 111 aa6.89□□□□□ -1.31
MRPS35-204ENST00000542199 SHISA9B4DS77 424 aa6.89□□□□□ -1.31
MRPS35-204ENST00000542199 FAAHO00519 579 aa6.89□□□□□ -1.31
MRPS35-204ENST00000542199 CLOCKO15516 846 aa6.89□□□□□ -1.31
MRPS35-204ENST00000542199 ZNF208O43345 1280 aa6.89□□□□□ -1.31
MRPS35-204ENST00000542199 HOXB6P17509 224 aaKnown RBP6.89□□□□□ -1.31
MRPS35-204ENST00000542199 SLC1A3P43003 542 aa6.89□□□□□ -1.31
MRPS35-204ENST00000542199 MAGEA8P43361 318 aa6.89□□□□□ -1.31
MRPS35-204ENST00000542199 ATP5J2P56134 94 aa6.89□□□□□ -1.31
MRPS35-204ENST00000542199 SCARB2Q14108 478 aa6.89□□□□□ -1.31
MRPS35-204ENST00000542199 PPA1Q15181 289 aa6.89□□□□□ -1.31
MRPS35-204ENST00000542199 MAPK11Q15759 364 aa6.89□□□□□ -1.31
MRPS35-204ENST00000542199 PGGHGQ32M88 737 aa6.89□□□□□ -1.31
MRPS35-204ENST00000542199 GPAT3Q53EU6 434 aa6.89□□□□□ -1.31
MRPS35-204ENST00000542199 TIMM23BQ5SRD1 257 aa6.89□□□□□ -1.31
MRPS35-204ENST00000542199 HHATQ5VTY9 493 aa6.89□□□□□ -1.31
MRPS35-204ENST00000542199 FBXW9Q5XUX1 488 aa6.89□□□□□ -1.31
MRPS35-204ENST00000542199 HMGN2P46Q86SG4 172 aa6.89□□□□□ -1.31
MRPS35-204ENST00000542199 TRPT1Q86TN4 253 aaKnown RBP6.89□□□□□ -1.31
MRPS35-204ENST00000542199 MAPKAPK5-AS1Q8N8E1 139 aa6.89□□□□□ -1.31
MRPS35-204ENST00000542199 THAP8Q8NA92 274 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms