RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 PMPCAQ10713 525 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 CLVS2Q5SYC1 327 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 KCTD18Q6PI47 426 aaPredicted RBP11.17□□□□□ -0.62
RNF4-222ENST00000541204 NUP54Q7Z3B4 507 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 CD163Q86VB7 1156 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 SLC6A7Q99884 636 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 PDCD10Q9BUL8 212 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 B3GNT4Q9C0J1 378 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 SLC25A32Q9H2D1 315 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 KLK13Q9UKR3 277 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 EMC9Q9Y3B6 208 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 NOP16Q9Y3C1 178 aaKnown RBP11.17□□□□□ -0.62
RNF4-222ENST00000541204 FREM3P0C091 2139 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 TTLL8A6PVC2 850 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 A8MVM7 634 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 LMX1BO60663 402 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 HLA-AP01891 365 aaKnown RBP11.17□□□□□ -0.62
RNF4-222ENST00000541204 ARHGDIBP52566 201 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 ATXN7L3Q14CW9 347 aaPredicted RBP11.17□□□□□ -0.62
RNF4-222ENST00000541204 TAF13Q15543 124 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 OR7A5Q15622 319 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 SGCBQ16585 318 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 ELP2Q6IA86 826 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 ACBD4Q8NC06 268 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 OR5M8Q8NGP6 311 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 OR13C3Q8NGS6 347 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 OR13C8Q8NGS7 320 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 ASB13Q8WXK3 278 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 CRB3Q9BUF7 120 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 DUSP23Q9BVJ7 150 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 KLRF1Q9NZS2 232 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 KIF26BQ2KJY2 2108 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 MED12Q93074 2177 aa11.17□□□□□ -0.62
RNF4-222ENST00000541204 OR6C76A6NM76 312 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 AHSA1O95433 338 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 UBBP0CG47 229 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 UBCP0CG48 685 aaKnown RBP11.16□□□□□ -0.62
RNF4-222ENST00000541204 ICAM2P13598 275 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 CD34P28906 385 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 DNASE1L1P49184 302 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 LUMP51884 338 aaPredicted RBP11.16□□□□□ -0.62
RNF4-222ENST00000541204 RPS27AP62979 156 aaKnown RBP11.16□□□□□ -0.62
RNF4-222ENST00000541204 UBA52P62987 128 aaKnown RBP11.16□□□□□ -0.62
RNF4-222ENST00000541204 TOMM20Q15388 145 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 LIN54Q6MZP7 749 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 JMJD6Q6NYC1 403 aaPredicted RBP11.16□□□□□ -0.62
RNF4-222ENST00000541204 LRFN4Q6PJG9 635 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 CORO6Q6QEF8 472 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 GRINAQ7Z429 371 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 RABEPKQ7Z6M1 372 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 ADGRE4PQ86SQ3 457 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 ZNF75AQ96N20 296 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 RASL12Q9NYN1 266 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 COA3Q9Y2R0 106 aaPredicted RBP11.16□□□□□ -0.62
RNF4-222ENST00000541204 A0A0D9SG52 128 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 A0A1B0GTI1 187 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 CD8AP01732 235 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 AGTR1P30556 359 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 LPAL2Q16609 132 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 C3orf33Q6P1S2 294 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 NFAM1Q8NET5 270 aaPredicted RBP11.16□□□□□ -0.62
RNF4-222ENST00000541204 ARPC5LQ9BPX5 153 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 TXNIPQ9H3M7 391 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 TAS2R3Q9NYW6 316 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 GPN3Q9UHW5 284 aaPredicted RBP11.16□□□□□ -0.62
RNF4-222ENST00000541204 KANTRA0A1W2PQU2 76 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 OR2J2O76002 312 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 STARP49675 285 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 FOXK1P85037 733 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 DEFA5Q01523 94 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 FMODQ06828 376 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 FGL1Q08830 312 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 PMS2CLQ68D20 193 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 C11orf87Q6NUJ2 197 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 PPP1R3BQ86XI6 285 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 BOLLQ8N9W6 283 aaKnown RBP11.16□□□□□ -0.62
RNF4-222ENST00000541204 OR4D6Q8NGJ1 314 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 OR52N5Q8NH56 324 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 ZBTB8AQ96BR9 441 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 GUCD1Q96NT3 240 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 VRK1Q99986 396 aaPredicted RBP11.16□□□□□ -0.62
RNF4-222ENST00000541204 TGIF2Q9GZN2 237 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 SCPEP1Q9HB40 452 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 BARX1Q9HBU1 254 aaPredicted RBP11.16□□□□□ -0.62
RNF4-222ENST00000541204 VSX1Q9NZR4 365 aaPredicted RBP11.16□□□□□ -0.62
RNF4-222ENST00000541204 PILRBQ9UKJ0 227 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 TNFSF18Q9UNG2 199 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 VSIG4Q9Y279 399 aa11.16□□□□□ -0.62
RNF4-222ENST00000541204 LOC101059948A0A1B0GTJ6 334 aa11.15□□□□□ -0.62
RNF4-222ENST00000541204 LOC107986453A0A1B0GWG9 222 aa11.15□□□□□ -0.62
RNF4-222ENST00000541204 TMEM200CA6NKL6 621 aa11.15□□□□□ -0.62
RNF4-222ENST00000541204 PLPP3O14495 311 aa11.15□□□□□ -0.62
RNF4-222ENST00000541204 PLATP00750 562 aa11.15□□□□□ -0.62
RNF4-222ENST00000541204 CD74P04233 296 aa11.15□□□□□ -0.62
RNF4-222ENST00000541204 FSTP19883 344 aa11.15□□□□□ -0.62
RNF4-222ENST00000541204 ZNF584Q8IVC4 421 aa11.15□□□□□ -0.62
RNF4-222ENST00000541204 LINC00346Q8IVM7 164 aa11.15□□□□□ -0.62
RNF4-222ENST00000541204 WDFY1Q8IWB7 410 aa11.15□□□□□ -0.62
RNF4-222ENST00000541204 KCNRGQ8N5I3 272 aa11.15□□□□□ -0.62
RNF4-222ENST00000541204 OR10G3Q8NGC4 313 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms