RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 SLC22A31A6NKX4 558 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 PHYHO14832 338 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 TIMM23O14925 209 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 SURF4O15260 269 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 MLNRO43193 412 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 TSPAN15O95858 294 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 LYNP07948 512 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 RAC2P15153 192 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 RPS2P15880 293 aaKnown RBP6.07□□□□□ -1.44
YBX3-209ENST00000540747 FUT4P22083 530 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 PSMB10P40306 273 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 GATA4P43694 442 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 PITPNBP48739 271 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 MTPNP58546 118 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 FGF12P61328 243 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 GNB2P62879 340 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 CYP51A1Q16850 503 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 LRRC36Q1X8D7 754 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 AGKQ53H12 422 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 FBLN7Q53RD9 439 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 KPRPQ5T749 579 aaPredicted RBP6.07□□□□□ -1.44
YBX3-209ENST00000540747 LPCAT4Q643R3 524 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 WDR25Q64LD2 544 aaPredicted RBP6.07□□□□□ -1.44
YBX3-209ENST00000540747 SLC27A4Q6P1M0 643 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 BRICD5Q6PL45 260 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 VASH1Q7L8A9 365 aaPredicted RBP6.07□□□□□ -1.44
YBX3-209ENST00000540747 SPATA24Q86W54 205 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 CALHM3Q86XJ0 350 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 SLC30A8Q8IWU4 369 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 PQLC1Q8N2U9 271 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 PCYOX1LQ8NBM8 494 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 LINC01006Q8NI28 216 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 ZNF420Q8TAQ5 688 aaPredicted RBP6.07□□□□□ -1.44
YBX3-209ENST00000540747 Q8TCH9 128 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 NEIL1Q96FI4 390 aaPredicted RBP6.07□□□□□ -1.44
YBX3-209ENST00000540747 TBX15Q96SF7 602 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 NUDT16L1Q9BRJ7 211 aaKnown RBP6.07□□□□□ -1.44
YBX3-209ENST00000540747 EMC7Q9NPA0 242 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 MIOXQ9UGB7 285 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 ATPIF1Q9UII2 106 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 RIMS3Q9UJD0 308 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 COL7A1Q02388 2944 aa6.07□□□□□ -1.44
YBX3-209ENST00000540747 CENPVL3A0A0U1RRI6 287 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 HTR3EA5X5Y0 456 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 C12orf71A8MTZ7 269 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 H0YL77 283 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 MRASO14807 208 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 CASQ2O14958 399 aaPredicted RBP6.06□□□□□ -1.44
YBX3-209ENST00000540747 SGCEO43556 437 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 PIP5K1CO60331 668 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 GPR137BO60478 399 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 DOK2O60496 412 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 FCN3O75636 299 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 ZNF205O95201 554 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 CYB5R3P00387 301 aaPredicted RBP6.06□□□□□ -1.44
YBX3-209ENST00000540747 ZNF26P17031 533 aaPredicted RBP6.06□□□□□ -1.44
YBX3-209ENST00000540747 TNFRSF1BP20333 461 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 CALRP27797 417 aaKnown RBP6.06□□□□□ -1.44
YBX3-209ENST00000540747 CFHR2P36980 270 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 HTR5AP47898 357 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 HSPA13P48723 471 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 RAD23AP54725 363 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 SCRN3Q0VDG4 424 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 TRAP1Q12931 704 aaKnown RBP6.06□□□□□ -1.44
YBX3-209ENST00000540747 TOP3AQ13472 1001 aaPredicted RBP6.06□□□□□ -1.44
YBX3-209ENST00000540747 PIN1Q13526 163 aaPredicted RBP6.06□□□□□ -1.44
YBX3-209ENST00000540747 HLXQ14774 488 aaPredicted RBP6.06□□□□□ -1.44
YBX3-209ENST00000540747 PDCD1Q15116 288 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 TAF9Q16594 264 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 VMACQ2NL98 169 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 BEAN1Q3B7T3 259 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 KRTAP27-1Q3LI81 207 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 ALG10Q5BKT4 473 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 CLEC12AQ5QGZ9 265 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 FAM201AQ5SY85 155 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 OGFRL1Q5TC84 451 aaPredicted RBP6.06□□□□□ -1.44
YBX3-209ENST00000540747 RUSC1-AS1Q66K80 236 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 ARL9Q6T311 187 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 LYPD2Q6UXB3 125 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 ZNF620Q6ZNG0 422 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 LDLRAD3Q86YD5 345 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 C1QL4Q86Z23 238 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 OR8G5Q8NG78 346 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 OR10AD1Q8NGE0 317 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 SSMEM1Q8WWF3 244 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 SLC7A6Q92536 515 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 DYRK2Q92630 601 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 PTP4A1Q93096 173 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 PLEKHA8Q96JA3 519 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 FAM71F1Q96KD3 344 aaPredicted RBP6.06□□□□□ -1.44
YBX3-209ENST00000540747 COG8Q96MW5 612 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 RBP7Q96R05 134 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 SLC30A2Q9BRI3 323 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 NDUFA13Q9P0J0 144 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 NDUFAF1Q9Y375 327 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 RNF114Q9Y508 228 aa6.06□□□□□ -1.44
YBX3-209ENST00000540747 A0A1W2PPL8 197 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 A6NIZ1 184 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 IQCF6A8MYZ5 107 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 ZNF879B4DU55 563 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms