RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 ATPAF1Q5TC12 328 aaPredicted RBP10.04□□□□□ -0.8
PBX1-212ENST00000540236 SLC43A2Q8N370 569 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 REEP6Q96HR9 211 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 DIRC2Q96SL1 478 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 ATP5SQ99766 215 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 WWTR1Q9GZV5 400 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 ADAM19Q9H013 955 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 ADGRL4Q9HBW9 690 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 SERTAD4Q9NUC0 356 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 DPM1O60762 260 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 MPC1LP0DKB6 136 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 RAG2P55895 527 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 MEP1BQ16820 701 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 TMEM35AQ53FP2 167 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 CMTM1Q8IZ96 169 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 LYSMD1Q96S90 227 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 ALG12Q9BV10 488 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 ADH1BP00325 375 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 SLC35G6P0C7Q6 338 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 SNCAP37840 140 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 CDC34P49427 236 aaPredicted RBP10.04□□□□□ -0.8
PBX1-212ENST00000540236 LINC00346Q8IVM7 164 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 CSNK1G1Q9HCP0 422 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 NAGKQ9UJ70 344 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 DTX4Q9Y2E6 619 aa10.04□□□□□ -0.8
PBX1-212ENST00000540236 CA11O75493 328 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 AP1S1P61966 158 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 EFNB1P98172 346 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 ZNF765Q7L2R6 523 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 ZNF550Q7Z398 422 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 TSEN54Q7Z6J9 526 aaKnown RBP10.03□□□□□ -0.8
PBX1-212ENST00000540236 OR1L6Q8NGR2 347 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 OR2T27Q8NH04 317 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 SLC39A7Q92504 469 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 VN1R1Q9GZP7 353 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 INPP5EQ9NRR6 644 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 A0A087WV48 116 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 MYOGP15173 224 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 RPS16P62249 146 aaKnown RBP10.03□□□□□ -0.8
PBX1-212ENST00000540236 PRSS53Q2L4Q9 553 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 KCNIP4Q6PIL6 250 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 FAAP24Q9BTP7 215 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 OR1D2P34982 312 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 WASP42768 502 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 EMP2P54851 167 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 HERV-K104P61576 105 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 MPV17LQ2QL34 196 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 OR4A47Q6IF82 309 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 SERINC2Q96SA4 455 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 ETV7Q9Y603 341 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 SCN4AP35499 1836 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 PRRX1P54821 245 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 TMEM33P57088 247 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 FAM71E1Q6IPT2 247 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 ZNF695Q8IW36 515 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 OR4A4PQ8NGN8 299 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 Q8WTZ3 238 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 NEURL3Q96EH8 262 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 PLK3Q9H4B4 646 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 ASCL3Q9NQ33 180 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 STARD5Q9NSY2 213 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 C1orf123Q9NWV4 160 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 SYT7O43581 403 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 PLPP2O43688 288 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 WNT11O96014 354 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 GUCA1AP43080 201 aaPredicted RBP10.03□□□□□ -0.8
PBX1-212ENST00000540236 CSNK1EP49674 416 aaKnown RBP10.03□□□□□ -0.8
PBX1-212ENST00000540236 SAPCD1Q5SSQ6 148 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 APOBEC3FQ8IUX4 373 aaKnown RBP10.03□□□□□ -0.8
PBX1-212ENST00000540236 SLC25A43Q8WUT9 341 aaPredicted RBP10.03□□□□□ -0.8
PBX1-212ENST00000540236 ZNF480Q8WV37 535 aa10.03□□□□□ -0.8
PBX1-212ENST00000540236 COCHO43405 550 aa10.02□□□□□ -0.8
PBX1-212ENST00000540236 HCRTR2O43614 444 aa10.02□□□□□ -0.8
PBX1-212ENST00000540236 HLA-HP01893 362 aa10.02□□□□□ -0.8
PBX1-212ENST00000540236 HNRNPKP61978 463 aaKnown RBP eCLIP10.02□□□□□ -0.8
PBX1-212ENST00000540236 CXorf40AQ8TE69 158 aa10.02□□□□□ -0.8
PBX1-212ENST00000540236 SLC25A38Q96DW6 304 aa10.02□□□□□ -0.8
PBX1-212ENST00000540236 ALKBH7Q9BT30 221 aaPredicted RBP10.02□□□□□ -0.8
PBX1-212ENST00000540236 RYDENQ9NUL5 291 aaKnown RBP10.02□□□□□ -0.8
PBX1-212ENST00000540236 CARHSP1Q9Y2V2 147 aaKnown RBP10.02□□□□□ -0.8
PBX1-212ENST00000540236 TRAV1-2A0A0B4J238 106 aa10.02□□□□□ -0.81
PBX1-212ENST00000540236 C4orf47A7E2U8 309 aa10.02□□□□□ -0.81
PBX1-212ENST00000540236 HIDE1A8MVS5 230 aa10.02□□□□□ -0.81
PBX1-212ENST00000540236 THBS2P35442 1172 aa10.02□□□□□ -0.81
PBX1-212ENST00000540236 CHRNA7P36544 502 aa10.02□□□□□ -0.81
PBX1-212ENST00000540236 OPN5Q6U736 354 aa10.02□□□□□ -0.81
PBX1-212ENST00000540236 PRR18Q8N4B5 295 aa10.02□□□□□ -0.81
PBX1-212ENST00000540236 ZNF461Q8TAF7 563 aa10.02□□□□□ -0.81
PBX1-212ENST00000540236 UBTD2Q8WUN7 234 aa10.02□□□□□ -0.81
PBX1-212ENST00000540236 EMC9Q9Y3B6 208 aa10.02□□□□□ -0.81
PBX1-212ENST00000540236 RICTORQ6R327 1708 aa10.02□□□□□ -0.81
PBX1-212ENST00000540236 OR2T7P0C7T2 308 aa10.02□□□□□ -0.81
PBX1-212ENST00000540236 OR51A4Q8NGJ6 313 aa10.02□□□□□ -0.81
PBX1-212ENST00000540236 FGGYQ96C11 551 aa10.02□□□□□ -0.81
PBX1-212ENST00000540236 TCTN2Q96GX1 697 aa10.02□□□□□ -0.81
PBX1-212ENST00000540236 GFYI3L273 518 aa10.02□□□□□ -0.81
PBX1-212ENST00000540236 ENDOGQ14249 297 aaKnown RBP10.02□□□□□ -0.81
PBX1-212ENST00000540236 VWA2Q5GFL6 755 aa10.02□□□□□ -0.81
PBX1-212ENST00000540236 TPRG1Q6ZUI0 275 aa10.02□□□□□ -0.81
PBX1-212ENST00000540236 OR51A2Q8NGJ7 313 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms