RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 TIGD4Q8IY51 512 aa15.58■□□□□ 0.08
SNRPA1-203ENST00000540017 ST7LQ8TDW4 575 aa15.58■□□□□ 0.08
SNRPA1-203ENST00000540017 APOBEC3DQ96AK3 386 aaPredicted RBP15.58■□□□□ 0.08
SNRPA1-203ENST00000540017 HAVCR1Q96D42 359 aa15.58■□□□□ 0.08
SNRPA1-203ENST00000540017 ZMYND19Q96E35 227 aaPredicted RBP15.58■□□□□ 0.08
SNRPA1-203ENST00000540017 C1QTNF5Q9BXJ0 243 aa15.58■□□□□ 0.08
SNRPA1-203ENST00000540017 MSL2Q9HCI7 577 aa15.58■□□□□ 0.08
SNRPA1-203ENST00000540017 DDX28Q9NUL7 540 aaKnown RBP15.58■□□□□ 0.08
SNRPA1-203ENST00000540017 NKIRAS2Q9NYR9 191 aa15.58■□□□□ 0.08
SNRPA1-203ENST00000540017 PURGQ9UJV8 347 aaKnown RBP15.58■□□□□ 0.08
SNRPA1-203ENST00000540017 YLPM1P49750 1951 aaKnown RBP15.58■□□□□ 0.08
SNRPA1-203ENST00000540017 ZFHX3Q15911 3703 aa15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 C5orf63A6NC05 138 aa15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 SAC3D1A6NKF1 404 aa15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 J3QW42 95 aa15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 M0R129 80 aa15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 SPRY3O43610 288 aa15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 TIMM8AO60220 97 aaPredicted RBP15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 KITLGP21583 273 aa15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 SLC2A5P22732 501 aa15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 TUBG1P23258 451 aa15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 BLVRAP53004 296 aa15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 SNAPC1Q16533 368 aa15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 TSTQ16762 297 aaKnown RBP15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 TMEM249Q2WGJ8 235 aa15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 Q6ZR03 302 aa15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 DPY19L4Q7Z388 723 aa15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 ERI1Q8IV48 349 aaKnown RBP15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 OR6N2Q8NGY6 317 aa15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 RDH5Q92781 318 aa15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 SLAMF6Q96DU3 332 aa15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 INTS14Q96SY0 518 aa15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 AMELYQ99218 206 aa15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 CIB1Q99828 191 aa15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 TUBG2Q9NRH3 451 aa15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 SETD2Q9BYW2 2564 aaPredicted RBP15.57■□□□□ 0.08
SNRPA1-203ENST00000540017 TLN2Q9Y4G6 2542 aa15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 PLSCR5A0PG75 271 aa15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 PRKYO43930 277 aa15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 SELENOFO60613 162 aa15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 CDC14BO60729 498 aa15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 RP2O75695 350 aa15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 RAC2P15153 192 aa15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 OTX1P32242 354 aaPredicted RBP15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 POLR2IP36954 125 aaKnown RBP15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 PRSS12P56730 875 aa15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 HNRNPA0Q13151 305 aaKnown RBP15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 PCGF3Q3KNV8 242 aa15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 KLHL12Q53G59 568 aa15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 FBXW12Q6X9E4 464 aa15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 SPATC1Q76KD6 591 aa15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 CXXC5Q7LFL8 322 aaKnown RBP15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 PLEKHA8Q96JA3 519 aa15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 COG8Q96MW5 612 aa15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 ZNF275Q9NSD4 429 aaPredicted RBP15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 CENPMQ9NSP4 180 aa15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 CACNG2Q9Y698 323 aa15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 NIPBLQ6KC79 2804 aaeCLIP15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 ANK3Q12955 4377 aaKnown RBP15.56■□□□□ 0.08
SNRPA1-203ENST00000540017 ZAR1LA6NP61 321 aa15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 M0R135 149 aa15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 PRODHO43272 600 aa15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 LILRA1O75019 489 aa15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 MT-ND5P03915 603 aa15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 LCATP04180 440 aa15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 ADH4P08319 380 aa15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 ACHEP22303 614 aa15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 IGFBP5P24593 272 aa15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 TPTEP56180 551 aa15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 EFNB1P98172 346 aa15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 PPP2R2BQ00005 443 aa15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 EIF2B1Q14232 305 aaKnown RBP15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 TRIP10Q15642 601 aa15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 SLX4IPQ5VYV7 408 aa15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 OR2T2Q6IF00 324 aa15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 BCDIN3DQ7Z5W3 292 aaKnown RBP15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 OR5AS1Q8N127 324 aa15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 OR5L1Q8NGL2 311 aa15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 ZNF799Q96GE5 643 aa15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 ABHD6Q9BV23 337 aa15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 OSBPL10Q9BXB5 764 aa15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 ABCA1O95477 2261 aa15.55■□□□□ 0.08
SNRPA1-203ENST00000540017 FN1P02751 2386 aaKnown RBP15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 LRP5LA4QPB2 252 aa15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 CCDC182A6NF36 153 aa15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 CD5LO43866 347 aa15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 IGHV4-31P0DP07 118 aa15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 RBMXP38159 391 aaKnown RBP15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 LIPAP38571 399 aa15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 PRKXP51817 358 aa15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 MRPS11P82912 194 aaKnown RBP15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 CDK5R2Q13319 367 aa15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 APOFQ13790 326 aa15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 SNAI3Q3KNW1 292 aa15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 C12orf73Q69YU5 71 aa15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 ZFP1Q6P2D0 407 aa15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 USP51Q70EK9 711 aa15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 ZNF540Q8NDQ6 660 aa15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 SPTSSAQ969W0 71 aa15.54■□□□□ 0.08
SNRPA1-203ENST00000540017 COPS4Q9BT78 406 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms