RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 RPL19P84098 196 aaKnown RBP9.01□□□□□ -0.97
TRAF1-202ENST00000540010 PDSS1Q5T2R2 415 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 OR4S1Q8NGB4 309 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 OR1S1Q8NH92 325 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 OR1L3Q8NH93 324 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 ULBP2Q9BZM5 246 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 URGCP-MRPS24S4R325 110 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 A0A0U1RQK1 487 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 TRIM64BA6NI03 449 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 OIP5O43482 229 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 LPLP06858 475 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 AVPR2P30518 371 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 SDHAP31040 664 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 GPR3P46089 330 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 NR0B2Q15466 257 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 TMEM164Q5U3C3 297 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 C1orf140Q5VVS0 124 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 CCDC71LQ8N9Z2 235 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 OR56B1Q8NGI3 324 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 PPP1R1CQ8WVI7 109 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 CTHRC1Q96CG8 243 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 ZNF578Q96N58 590 aaPredicted RBP9.01□□□□□ -0.97
TRAF1-202ENST00000540010 GUCD1Q96NT3 240 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 NKX6-2Q9C056 277 aaPredicted RBP9.01□□□□□ -0.97
TRAF1-202ENST00000540010 TAS2R5Q9NYW4 299 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 DTX4Q9Y2E6 619 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 TIMM8BQ9Y5J9 83 aaPredicted RBP9.01□□□□□ -0.97
TRAF1-202ENST00000540010 CSAG2Q9Y5P2 127 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 A0A1B0GUH1 482 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 P04436 131 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 ALOX5APP20292 161 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 POLR2HP52434 150 aaKnown RBP9.01□□□□□ -0.97
TRAF1-202ENST00000540010 NKX6-1P78426 367 aaPredicted RBP9.01□□□□□ -0.97
TRAF1-202ENST00000540010 PHLDA2Q53GA4 152 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 NHLRC1Q6VVB1 395 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 CMTM1Q8IZ96 169 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 TMEM217Q8N7C4 229 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 BCORP1Q8N888 145 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 OR10Z1Q8NGY1 313 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 MAFAQ8NHW3 353 aaPredicted RBP9.01□□□□□ -0.97
TRAF1-202ENST00000540010 FRZBQ92765 325 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 EDAQ92838 391 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 SIGLEC11Q96RL6 698 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 MED29Q9NX70 200 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 COL4A2P08572 1712 aa9.01□□□□□ -0.97
TRAF1-202ENST00000540010 A8MVM7 634 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 C10orf142B7Z368 130 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 TGFBR3LH3BV60 316 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 PDGFBP01127 241 aaPredicted RBP9□□□□□ -0.97
TRAF1-202ENST00000540010 ADRB1P08588 477 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 SERPINF1P36955 418 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 CLDN17P56750 224 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 CD300LDQ6UXZ3 194 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 RAB11FIP2Q7L804 512 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 MDGA2Q7Z553 956 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 CPEB2Q7Z5Q1 589 aaKnown RBP9□□□□□ -0.97
TRAF1-202ENST00000540010 C14orf79Q96F83 325 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 SLC46A1Q96NT5 459 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 SLCO5A1Q9H2Y9 848 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 TMEM184BQ9Y519 407 aaPredicted RBP9□□□□□ -0.97
TRAF1-202ENST00000540010 SDK2Q58EX2 2172 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 NXPH3O95157 252 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 GPANK1O95872 356 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 ZNF136P52737 540 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 TMEM201Q5SNT2 666 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 LSRQ86X29 649 aaPredicted RBP9□□□□□ -0.97
TRAF1-202ENST00000540010 ZNF100Q8IYN0 542 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 SECTM1Q8WVN6 248 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 VSTM2LQ96N03 204 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 WWTR1Q9GZV5 400 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 GAREM1Q9H706 876 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 NIT2Q9NQR4 276 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 ZFP57Q9NU63 452 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 ZNF629Q9UEG4 869 aaPredicted RBP9□□□□□ -0.97
TRAF1-202ENST00000540010 KCNE5Q9UJ90 142 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 RAB22AQ9UL26 194 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 MMACHCQ9Y4U1 282 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 LANCL1O43813 399 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 CD79AP11912 226 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 CD53P19397 219 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 MSX1P28360 303 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 SLC6A1P30531 599 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 RPL27P61353 136 aaKnown RBP9□□□□□ -0.97
TRAF1-202ENST00000540010 SOHLH1Q5JUK2 328 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 SFRP5Q5T4F7 317 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 AVPI1Q5T686 147 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 FJX1Q86VR8 437 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 ARIH2OSQ8N7S6 290 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 GPR119Q8TDV5 335 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 SPIN2AQ99865 258 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 SPIN2BQ9BPZ2 258 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 TINAGL1Q9GZM7 467 aaPredicted RBP9□□□□□ -0.97
TRAF1-202ENST00000540010 TWSG1Q9GZX9 223 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 OR10A2Q9H208 303 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 PIGMQ9H3S5 423 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 DLL4Q9NR61 685 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 FAM212BQ9NTI7 297 aaPredicted RBP9□□□□□ -0.97
TRAF1-202ENST00000540010 SLCO1C1Q9NYB5 712 aa9□□□□□ -0.97
TRAF1-202ENST00000540010 PURGQ9UJV8 347 aaKnown RBP9□□□□□ -0.97
TRAF1-202ENST00000540010 A0A1B0GX78 115 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms