RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 ZNF169Q14929 603 aaPredicted RBP14.91□□□□□ -0.02
COPS3-212ENST00000539941 RNPS1Q15287 305 aaKnown RBP14.91□□□□□ -0.02
COPS3-212ENST00000539941 TAB1Q15750 504 aa14.91□□□□□ -0.02
COPS3-212ENST00000539941 PHYHD1Q5SRE7 291 aa14.91□□□□□ -0.02
COPS3-212ENST00000539941 CHMP1BQ7LBR1 199 aa14.91□□□□□ -0.02
COPS3-212ENST00000539941 GDPD1Q8N9F7 314 aa14.91□□□□□ -0.02
COPS3-212ENST00000539941 ABHD3Q8WU67 409 aa14.91□□□□□ -0.02
COPS3-212ENST00000539941 WDYHV1Q96HA8 205 aa14.91□□□□□ -0.02
COPS3-212ENST00000539941 PPA2Q9H2U2 334 aa14.91□□□□□ -0.02
COPS3-212ENST00000539941 LHFPL6Q9Y693 200 aa14.91□□□□□ -0.02
COPS3-212ENST00000539941 OR6C65A6NJZ3 312 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 ZNF724A8MTY0 619 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 A8MV72 311 aaPredicted RBP14.9□□□□□ -0.02
COPS3-212ENST00000539941 CLEC2LP0C7M8 214 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 MAPK3P27361 379 aaPredicted RBP14.9□□□□□ -0.02
COPS3-212ENST00000539941 CDAP32320 146 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 MRPS34P82930 218 aaKnown RBP14.9□□□□□ -0.02
COPS3-212ENST00000539941 PMP22Q01453 160 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 ZBTB37Q5TC79 503 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 GPR137CQ8N3F9 429 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 CPT1CQ8TCG5 803 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 SLAMF6Q96DU3 332 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 UQCC2Q9BRT2 126 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 PRRG4Q9BZD6 226 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 BCO1Q9HAY6 547 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 EMC7Q9NPA0 242 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 PARPBPQ9NWS1 579 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 SPRR3Q9UBC9 169 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 NUFIP1Q9UHK0 495 aaKnown RBP14.9□□□□□ -0.02
COPS3-212ENST00000539941 GDF2Q9UK05 429 aaPredicted RBP14.9□□□□□ -0.02
COPS3-212ENST00000539941 LHX6Q9UPM6 363 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 R4GMQ9 66 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 ZNF407Q9C0G0 2248 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 A0A1B0GVC2 190 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 ZNF879B4DU55 563 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 NDUFA2O43678 99 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 H2BFMP0C1H6 154 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 NPR2P20594 1047 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 TNFSF8P32971 234 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 EIF2S3P41091 472 aaKnown RBP14.9□□□□□ -0.02
COPS3-212ENST00000539941 MAB21L1Q13394 359 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 STK11Q15831 433 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 OR7E24Q6IFN5 339 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 CATSPERDQ86XM0 798 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.9□□□□□ -0.02
COPS3-212ENST00000539941 SPACA3Q8IXA5 215 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 PRSS35Q8N3Z0 413 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 OR13C5Q8NGS8 318 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 PLEKHB1Q9UF11 243 aaPredicted RBP14.9□□□□□ -0.02
COPS3-212ENST00000539941 NOSIPQ9Y314 301 aaKnown RBP14.9□□□□□ -0.02
COPS3-212ENST00000539941 ZNF175Q9Y473 711 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 DNAJC13O75165 2243 aa14.9□□□□□ -0.02
COPS3-212ENST00000539941 CACNA1CQ13936 2221 aa14.89□□□□□ -0.03
COPS3-212ENST00000539941 TRBV5-5A0A0J9YX44 114 aa14.89□□□□□ -0.03
COPS3-212ENST00000539941 SHISA3A0PJX4 238 aa14.89□□□□□ -0.03
COPS3-212ENST00000539941 TUBAL3A6NHL2 446 aa14.89□□□□□ -0.03
COPS3-212ENST00000539941 ZNF878C9JN71 531 aa14.89□□□□□ -0.03
COPS3-212ENST00000539941 DVL2O14641 736 aa14.89□□□□□ -0.03
COPS3-212ENST00000539941 SRSF10O75494 262 aaKnown RBP14.89□□□□□ -0.03
COPS3-212ENST00000539941 WNT11O96014 354 aa14.89□□□□□ -0.03
COPS3-212ENST00000539941 ATF4P18848 351 aaPredicted RBP14.89□□□□□ -0.03
COPS3-212ENST00000539941 NTF4P34130 210 aa14.89□□□□□ -0.03
COPS3-212ENST00000539941 Q499Y3 187 aa14.89□□□□□ -0.03
COPS3-212ENST00000539941 WDR38Q5JTN6 314 aa14.89□□□□□ -0.03
COPS3-212ENST00000539941 CORO6Q6QEF8 472 aa14.89□□□□□ -0.03
COPS3-212ENST00000539941 Q6ZS92 163 aa14.89□□□□□ -0.03
COPS3-212ENST00000539941 ZNF676Q8N7Q3 588 aa14.89□□□□□ -0.03
COPS3-212ENST00000539941 RGP1Q92546 391 aaPredicted RBP14.89□□□□□ -0.03
COPS3-212ENST00000539941 NABP1Q96AH0 204 aa14.89□□□□□ -0.03
COPS3-212ENST00000539941 ZC3HAV1LQ96H79 300 aaKnown RBP14.89□□□□□ -0.03
COPS3-212ENST00000539941 NEDD4LQ96PU5 975 aa14.89□□□□□ -0.03
COPS3-212ENST00000539941 FYTTD1Q96QD9 318 aaKnown RBP14.89□□□□□ -0.03
COPS3-212ENST00000539941 OR14A2Q96R54 314 aa14.89□□□□□ -0.03
COPS3-212ENST00000539941 RBM24Q9BX46 236 aaKnown RBP14.89□□□□□ -0.03
COPS3-212ENST00000539941 LINC00470Q9BZP3 86 aa14.89□□□□□ -0.03
COPS3-212ENST00000539941 PPIL3Q9H2H8 161 aaKnown RBP14.89□□□□□ -0.03
COPS3-212ENST00000539941 GP6Q9HCN6 339 aa14.89□□□□□ -0.03
COPS3-212ENST00000539941 AQP7O14520 342 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 SSX4O60224 188 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 MRPL33O75394 65 aaKnown RBP14.88□□□□□ -0.03
COPS3-212ENST00000539941 SLC22A5O76082 557 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 FCGR2AP12318 317 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 KIR3DL2P43630 455 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 MMP16P51512 607 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 CD83Q01151 205 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 SGCAQ16586 387 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 HSD17B12Q53GQ0 312 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 PXDC1Q5TGL8 231 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 FAM27BQ5VT28 67 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 MZT2BQ6NZ67 158 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 KLHL24Q6TFL4 600 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 FNDC9Q8TBE3 224 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 ENKURQ8TC29 256 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 GPR148Q8TDV2 347 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 ZNF775Q96BV0 537 aaPredicted RBP14.88□□□□□ -0.03
COPS3-212ENST00000539941 KCNS3Q9BQ31 491 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 SRRQ9GZT4 340 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 PRDM14Q9GZV8 571 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 CENPMQ9NSP4 180 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 C14orf119Q9NWQ9 140 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms