RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 CCDC59Q9P031 241 aaKnown RBP3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 STOML2Q9UJZ1 356 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 FBXL3Q9UKT7 428 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 TCF19Q9Y242 345 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 KCNIP3Q9Y2W7 256 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 WIF1Q9Y5W5 379 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 CACNG2Q9Y698 323 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 STYXL1Q9Y6J8 313 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 CSNK1G3Q9Y6M4 447 aa3.2□□□□□ -1.9
AC055720.1-201ENST00000539552 ELP1O95163 1332 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 IGLV5-37A0A075B6J1 123 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 GLYATL1P3A0A0U1RQE8 302 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 A0A1B0GTH9 108 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 TSPAN11A1L157 253 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 OR5H15A6NDH6 313 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 HIDE1A8MVS5 230 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 SNURFLB1AK76 121 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 IDSB3KWA1 339 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 H3BMQ9 156 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 K7EN84 100 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 PLPP1O14494 284 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 DYNC1I1O14576 645 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 TNFRSF13BO14836 293 aaPredicted RBP3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 ALOX12BO75342 701 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 MPDU1O75352 247 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 CDK2AP2O75956 126 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 LYPLA2O95372 231 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 HPP00738 406 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 HBE1P02100 147 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 TNNC2P02585 160 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 RNH1P13489 461 aaKnown RBP3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 COX5AP20674 150 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 DTYMKP23919 212 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 EDNRAP25101 427 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 CCKARP32238 428 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 SAA4P35542 130 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 MAGEA3P43357 314 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 DAP3P51398 398 aaKnown RBP3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 FUT6P51993 359 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 DVL1P1P54792 670 aaPredicted RBP3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 UGT2B15P54855 530 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 DLX5P56178 289 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 FBXW4P57775 412 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 SSBP2P81877 361 aaPredicted RBP3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 ZNF33BQ06732 778 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 C2orf54Q08AI8 447 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 ARL16Q0P5N6 197 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 SMARCB1Q12824 385 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 ZNF155Q12901 538 aaPredicted RBP3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 ILF3Q12906 894 aaKnown RBP eCLIP3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 PDIA2Q13087 525 aaKnown RBP3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 TRAF3Q13114 568 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 TAL2Q16559 108 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 POU2AF1Q16633 256 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 GUK1Q16774 197 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 FAM106AQ4KMX7 169 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 SYPL2Q5VXT5 272 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 LPCAT4Q643R3 524 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 DUPD1Q68J44 220 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 OR8G2PQ6IF36 304 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 SPOPLQ6IQ16 392 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 C8orf82Q6P1X6 216 aaPredicted RBP3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 DRAM2Q6UX65 266 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 STAC2Q6ZMT1 411 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 USP43Q70EL4 1123 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 CMC1Q7Z7K0 106 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 IFNEQ86WN2 208 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 OR4N5Q8IXE1 308 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 ODF3L1Q8IXM7 274 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 ABHD12Q8N2K0 398 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 KIF2BQ8N4N8 673 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 OR2L5Q8NG80 312 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 OR6F1Q8NGZ6 308 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 RNASEH2CQ8TDP1 164 aaKnown RBP3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 FAM222BQ8WU58 562 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 HPSE2Q8WWQ2 592 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 UFD1Q92890 307 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 NTAN1Q96AB6 310 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 OMA1Q96E52 524 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 SGTBQ96EQ0 304 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 C17orf77Q96MU5 243 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 NOL4LQ96MY1 436 aaPredicted RBP3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 PRAP1Q96NZ9 151 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 ZNF385AQ96PM9 386 aaKnown RBP3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 PRRT1Q99946 306 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 KLHDC3Q9BQ90 382 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 COPS4Q9BT78 406 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 CHRNA10Q9GZZ6 450 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 REEP4Q9H6H4 257 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 BEX1Q9HBH7 125 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 ACP6Q9NPH0 428 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 C19orf12Q9NSK7 152 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 NLE1Q9NVX2 485 aaPredicted RBP3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 MCUBQ9NWR8 336 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 PAK1IP1Q9NWT1 392 aaPredicted RBP3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 CLN6Q9NWW5 311 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 HRASLS2Q9NWW9 162 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 UVRAGQ9P2Y5 699 aa3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 EIF3KQ9UBQ5 218 aaKnown RBP3.19□□□□□ -1.9
AC055720.1-201ENST00000539552 KCNS2Q9ULS6 477 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms