RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 RNF144BQ7Z419 303 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 LINC00346Q8IVM7 164 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 ARMC10Q8N2F6 343 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 ZDHHC12Q96GR4 267 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 VN1R1Q9GZP7 353 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 SLC25A32Q9H2D1 315 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 MED9Q9NWA0 146 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 EPHA6Q9UF33 1036 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 KLK13Q9UKR3 277 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 EDARQ9UNE0 448 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 IGLV1-36A0A0B4J1U3 117 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 TMEM218A2RU14 115 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 OR14I1A6ND48 311 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 SLC16A7O60669 478 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 CRYBA1P05813 215 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 IL13RA1P78552 427 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 PLCXD2Q0VAA5 305 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 GTPBP8Q8N3Z3 284 aaPredicted RBP11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 C8orf44Q96CB5 159 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 OR8B4Q96RC9 309 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 SCPEP1Q9HB40 452 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 ATPIF1Q9UII2 106 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 CA14Q9ULX7 337 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 FREM2Q5SZK8 3169 aa11.23□□□□□ -0.61
SFSWAP-208ENST00000539506 IGHV1OR21-1A0A087WYE8 117 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 A0A1W2PPC1 479 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 MED19A0JLT2 244 aaPredicted RBP11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 TMEM212A6NML5 194 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 RHPN2P1A8MT19 583 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 CDC40O60508 579 aaKnown RBP eCLIP11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 OR6A2O95222 327 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 MAPK3P27361 379 aaPredicted RBP11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 PRKXP51817 358 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 GPR85P60893 370 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 ADAM8P78325 824 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 HSD11B2P80365 405 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 FLI1Q01543 452 aaPredicted RBP11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 SLC17A1Q14916 467 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 IGSF11Q5DX21 431 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 ZNF441Q8N8Z8 693 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 OR13C8Q8NGS7 320 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 METTL21AQ8WXB1 218 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 DCUN1D4Q92564 292 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 ZNF576Q9H609 170 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 CTSFQ9UBX1 484 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 GPN3Q9UHW5 284 aaPredicted RBP11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 MKL2Q9ULH7 1088 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 CPAMD8Q8IZJ3 1885 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 TMED7-TICAM2A0A0A6YYA0 188 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 AQP8O94778 261 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 PMP2P02689 132 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 CASRP41180 1078 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 SLC6A8P48029 635 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 RPL27P61353 136 aaKnown RBP11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 BIKQ13323 160 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 MOB3CQ70IA8 216 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 OR2I1PQ8NGU4 316 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 GPR119Q8TDV5 335 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 OIT3Q8WWZ8 545 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 TBL1XR1Q9BZK7 514 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 RAB33BQ9H082 229 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 ETV7Q9Y603 341 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 A0A1B0GV50 99 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 ZNF217O75362 1048 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 ADAP1O75689 374 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 DXOO77932 396 aaKnown RBP11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 ERCC1P07992 297 aaPredicted RBP11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 UBBP0CG47 229 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 UBCP0CG48 685 aaKnown RBP11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 SNRPEP62304 92 aaKnown RBP11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 RPS27AP62979 156 aaKnown RBP11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 UBA52P62987 128 aaKnown RBP11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 MRPS10P82664 201 aaKnown RBP11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 SLC9A3R2Q15599 337 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 SGCBQ16585 318 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 TEX30Q5JUR7 227 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 CLEC9AQ6UXN8 241 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 EID2Q8N6I1 236 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 INO80EQ8NBZ0 244 aaPredicted RBP11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 OR1N1Q8NGS0 311 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 LILRB1Q8NHL6 650 aaPredicted RBP11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 ZNF417Q8TAU3 575 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 SLC25A44Q96H78 314 aaPredicted RBP11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 ZC3H10Q96K80 434 aaKnown RBP11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 FAM117AQ9C073 453 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 GAREM1Q9H706 876 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 SLC2A4RGQ9NR83 387 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 TNFSF18Q9UNG2 199 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 CSAG2Q9Y5P2 127 aa11.22□□□□□ -0.61
SFSWAP-208ENST00000539506 TRBV23-1A0A0A0MS06 115 aa11.21□□□□□ -0.61
SFSWAP-208ENST00000539506 A0A1W2PQD3 144 aa11.21□□□□□ -0.61
SFSWAP-208ENST00000539506 ITGB2P05107 769 aa11.21□□□□□ -0.61
SFSWAP-208ENST00000539506 CBX5P45973 191 aa11.21□□□□□ -0.61
SFSWAP-208ENST00000539506 NXPH1P58417 271 aa11.21□□□□□ -0.61
SFSWAP-208ENST00000539506 SCRN3Q0VDG4 424 aa11.21□□□□□ -0.61
SFSWAP-208ENST00000539506 PAN3Q58A45 887 aaKnown RBP11.21□□□□□ -0.61
SFSWAP-208ENST00000539506 CDCP2Q5VXM1 449 aa11.21□□□□□ -0.61
SFSWAP-208ENST00000539506 SLC29A4Q7RTT9 530 aa11.21□□□□□ -0.61
SFSWAP-208ENST00000539506 UTP23Q9BRU9 249 aaKnown RBP11.21□□□□□ -0.61
SFSWAP-208ENST00000539506 CENPMQ9NSP4 180 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms