RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 ZNF283Q8N7M2 679 aa16.08■□□□□ 0.16
TNFRSF1A-212ENST00000539372 BHLHE23Q8NDY6 225 aa16.08■□□□□ 0.16
TNFRSF1A-212ENST00000539372 ST7LQ8TDW4 575 aa16.08■□□□□ 0.16
TNFRSF1A-212ENST00000539372 TRIM15Q9C019 465 aa16.08■□□□□ 0.16
TNFRSF1A-212ENST00000539372 MRPL22Q9NWU5 206 aaKnown RBP16.08■□□□□ 0.16
TNFRSF1A-212ENST00000539372 CYB5R1Q9UHQ9 305 aa16.08■□□□□ 0.16
TNFRSF1A-212ENST00000539372 PCDHB10Q9UN67 800 aa16.08■□□□□ 0.16
TNFRSF1A-212ENST00000539372 PPP1R3CQ9UQK1 317 aa16.08■□□□□ 0.16
TNFRSF1A-212ENST00000539372 IGHV3-64DA0A0J9YX35 117 aa16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 H0YL77 283 aa16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 BHLHE40O14503 412 aa16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 SURF4O15260 269 aa16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 VENTXO95231 258 aa16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 ACSM4P0C7M7 580 aa16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 ZFP36P26651 326 aaKnown RBP16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 MAGEA2P43356 314 aa16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 MS4A2Q01362 244 aa16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 TRAP1Q12931 704 aaKnown RBP16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 ZNF770Q6IQ21 691 aaPredicted RBP16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 NAA40Q86UY6 237 aa16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 DHFR2Q86XF0 187 aa16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 AQP11Q8NBQ7 271 aa16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 PROKR2Q8NFJ6 384 aa16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 OR8G5Q8NG78 346 aa16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 OR8D4Q8NGM9 314 aa16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 ZNF582Q96NG8 517 aaPredicted RBP16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 SIGLEC11Q96RL6 698 aa16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 ATF6BQ99941 703 aa16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 PNRC2Q9NPJ4 139 aaKnown RBP16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 VNN3Q9NY84 501 aa16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 U3KQV3 271 aa16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 DYSFO75923 2080 aa16.07■□□□□ 0.16
TNFRSF1A-212ENST00000539372 TVP23AA6NH52 213 aa16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 ZNF823P16415 610 aa16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 EPHA1P21709 976 aa16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 RPS27P42677 84 aaKnown RBP16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 MMP16P51512 607 aa16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 BTG1P62324 171 aa16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 ZMYND11Q15326 602 aa16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 LCN8Q6JVE9 175 aa16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 RPL13AP3Q6NVV1 102 aa16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 LYPD4Q6UWN0 246 aa16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 LINC00471Q8N535 108 aa16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 OR51L1Q8NGJ5 315 aa16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 OR13G1Q8NGZ3 307 aa16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 ZNF420Q8TAQ5 688 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 ZNRF4Q8WWF5 429 aa16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 MAP6Q96JE9 813 aa16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 MEGF10Q96KG7 1140 aa16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 DDOQ99489 341 aa16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 C1QTNF5Q9BXJ0 243 aa16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 MAGIXQ9H6Y5 334 aa16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 C7orf69Q9H7B7 122 aa16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 GCM1Q9NP62 436 aa16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 TBC1D23Q9NUY8 699 aa16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 IL20Q9NYY1 176 aa16.06■□□□□ 0.16
TNFRSF1A-212ENST00000539372 IQCF6A8MYZ5 107 aa16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 F5H5P2 479 aa16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 J3QLI3 93 aa16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 SOX14O95416 240 aa16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 LCATP04180 440 aa16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 PSKH1P11801 424 aa16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 ECH1Q13011 328 aa16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 SCGB2A2Q13296 93 aa16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 TRIM25Q14258 630 aaKnown RBP16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 SLC27A4Q6P1M0 643 aa16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 COLCA1Q6ZS62 124 aa16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 RASSF6Q6ZTQ3 369 aa16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 C1QL2Q7Z5L3 287 aa16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 LRRC28Q86X40 367 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 ARHGAP24Q8N264 748 aa16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 KLHL36Q8N4N3 616 aa16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 SPICQ8N5J4 248 aa16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 SLC37A3Q8NCC5 494 aa16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 CCDC197Q8NCU1 140 aa16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 OR9Q1Q8NGQ5 310 aa16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 SLC30A2Q9BRI3 323 aa16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 TSSK6Q9BXA6 273 aa16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 HCAR1Q9BXC0 346 aa16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 MUC13Q9H3R2 512 aa16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 SAMHD1Q9Y3Z3 626 aaKnown RBP16.05■□□□□ 0.16
TNFRSF1A-212ENST00000539372 TMEM178BH3BS89 294 aa16.04■□□□□ 0.16
TNFRSF1A-212ENST00000539372 MLNRO43193 412 aa16.04■□□□□ 0.16
TNFRSF1A-212ENST00000539372 FOXH1O75593 365 aa16.04■□□□□ 0.16
TNFRSF1A-212ENST00000539372 ZNF205O95201 554 aa16.04■□□□□ 0.16
TNFRSF1A-212ENST00000539372 FAM107AO95990 144 aa16.04■□□□□ 0.16
TNFRSF1A-212ENST00000539372 HLA-DPB1P04440 258 aa16.04■□□□□ 0.16
TNFRSF1A-212ENST00000539372 T-ENOLP0DO92 83 aa16.04■□□□□ 0.16
TNFRSF1A-212ENST00000539372 CALB2P22676 271 aa16.04■□□□□ 0.16
TNFRSF1A-212ENST00000539372 SEC61A1P61619 476 aaKnown RBP16.04■□□□□ 0.16
TNFRSF1A-212ENST00000539372 GK2Q14410 553 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF1A-212ENST00000539372 TMEM155Q4W5P6 130 aa16.04■□□□□ 0.16
TNFRSF1A-212ENST00000539372 FAM98BQ52LJ0 330 aaKnown RBP16.04■□□□□ 0.16
TNFRSF1A-212ENST00000539372 ZNF362Q5T0B9 420 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF1A-212ENST00000539372 OR2T5Q6IEZ7 315 aa16.04■□□□□ 0.16
TNFRSF1A-212ENST00000539372 TEX29Q8N6K0 151 aa16.04■□□□□ 0.16
TNFRSF1A-212ENST00000539372 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF1A-212ENST00000539372 SEMA6DQ8NFY4 1073 aa16.04■□□□□ 0.16
TNFRSF1A-212ENST00000539372 OR10S1Q8NGN2 331 aa16.04■□□□□ 0.16
TNFRSF1A-212ENST00000539372 OR2T4Q8NH00 348 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms