RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 MBTPS2O43462 519 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 RAD1O60671 282 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 SLC19A2O60779 497 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF780AO75290 641 aaPredicted RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 YIF1AO95070 293 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 SCELO95171 688 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 VAMP5O95183 116 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 CGAP01215 116 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ANXA5P08758 320 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 CCDC172P0C7W6 258 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 NCF2P19878 526 aaPredicted RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 DNASE1L1P49184 302 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 UBE2MP61081 183 aaKnown RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 CDH17Q12864 832 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 AQP6Q13520 282 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 RNF212Q495C1 297 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 C1orf100Q5SVJ3 147 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 GFI1BQ5VTD9 330 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 DNAJC24Q6P3W2 148 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ACOT7LQ6ZUV0 252 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 NDUFAF7Q7L592 441 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 MYPOPQ86VE0 399 aaPredicted RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 LRRC6Q86X45 466 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 PDIK1LQ8N165 341 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 FNDC5Q8NAU1 212 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 KLHL30-AS1Q8NEE0 82 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 OR4F6Q8NGB9 312 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 OR56A4Q8NGH8 313 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 OR5B3Q8NH48 314 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 NDNFQ8TB73 568 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 SYNPRQ8TBG9 265 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 FAM222BQ8WU58 562 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 DEDD2Q8WXF8 326 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 RORBQ92753 470 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 KIFAP3Q92845 792 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ELSPBP1Q96BH3 223 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 RCN3Q96D15 328 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ITCHQ96J02 903 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 IL4I1Q96RQ9 567 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 CLCC1Q96S66 551 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ARHGDIGQ99819 225 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 AGMATQ9BSE5 352 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 SLC17A9Q9BYT1 436 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 OR51M1Q9H341 326 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 RPS10P5Q9NQ39 176 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 MMP26Q9NRE1 261 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 PNO1Q9NRX1 252 aaKnown RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 SPANXB1Q9NS25 103 aaPredicted RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 STMN3Q9NZ72 180 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 MUTYHQ9UIF7 546 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 NAGKQ9UJ70 344 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ENPP5Q9UJA9 477 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 TBC1D24Q9ULP9 559 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 MOKQ9UQ07 419 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 CFL2Q9Y281 166 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 SVILO95425 2214 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 DOCK9Q9BZ29 2069 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ADAMTS9Q9P2N4 1935 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 RPRD2Q5VT52 1461 aaKnown RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF518AQ6AHZ1 1483 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 NUP210LQ5VU65 1888 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 NALCNQ8IZF0 1738 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 TRPM3Q9HCF6 1732 aaPredicted RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 LOC100506127A0A0U1RQW1 187 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 CLDN34H7C241 214 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 LINC01565O15544 149 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 DENRO43583 198 aaKnown RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 CIAO1O76071 339 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 AHSA1O95433 338 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 BGLAPP02818 100 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 PSKH1P11801 424 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF35P13682 527 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 GABRG2P18507 467 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TCN1P20061 433 aaPredicted RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 RAB3BP20337 219 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ATP6V1B2P21281 511 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 SYT1P21579 422 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 HTR1FP30939 366 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 KLK7P49862 253 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 CRISP1P54107 249 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 VSX2P58304 361 aaPredicted RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 DSCR10P59022 87 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 KRTAP10-12P60413 245 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 RAD51Q06609 339 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 HNRNPA1L2Q32P51 320 aaKnown RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TIGD3Q6B0B8 471 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TEX43Q6ZNM6 134 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TPGS1Q6ZTW0 290 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 OR2W3Q7Z3T1 314 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TMEM150AQ86TG1 271 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 RNF175Q8N4F7 328 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 NECAP1Q8NC96 275 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 FBXL13Q8NEE6 735 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 B3GNT7Q8NFL0 401 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 OR52I1Q8NGK6 324 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 OR6Q1Q8NGQ2 317 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 OR2G3Q8NGZ4 309 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 OR2V1Q8NHB1 315 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 PYURFQ96I23 114 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 PRRC1Q96M27 445 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms