RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 AIREO43918 545 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 MITFO75030 526 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-208ENST00000538266 TNFSF13O75888 250 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 SOX14O95416 240 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 CLDN14O95500 239 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 IGHV3-9P01782 118 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 IGHG1P01857 330 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 KRT8P05787 483 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 CD14P08571 375 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 PRKACGP22612 351 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 SOX6P35712 828 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 OR3A2P47893 321 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 CSNK1A1P48729 337 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 ASCL1P50553 236 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 P2RY4P51582 365 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 BIDP55957 195 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 RAP1BP61224 184 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 RPS4XP62701 263 aaKnown RBP3.78□□□□□ -1.8
SNHG1-208ENST00000538266 RAP1AP62834 184 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 IFITM3Q01628 133 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 ZNF45Q02386 682 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 TGFBR3Q03167 851 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 LTBQ06643 244 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 CD300CQ08708 224 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 ZP4Q12836 540 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 COX10Q12887 443 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 P2RY6Q15077 328 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 GUSBP1Q15486 140 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 ACKR1Q16570 336 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 MS4A18Q3C1V0 323 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 TIMM50Q3ZCQ8 353 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 SPANXN2Q5MJ10 180 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 CLEC12AQ5QGZ9 265 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 ZNF362Q5T0B9 420 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-208ENST00000538266 RSBN1Q5VWQ0 802 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-208ENST00000538266 FBXW9Q5XUX1 488 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 KDM4DQ6B0I6 523 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 GPR139Q6DWJ6 353 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 ZNF770Q6IQ21 691 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-208ENST00000538266 ZNF544Q6NX49 715 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 NIPAL3Q6P499 406 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 FAHD1Q6P587 224 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 SMARCD3Q6STE5 483 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 TFAP2EQ6VUC0 442 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 DPY19L2P2Q6ZN68 376 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 Q6ZT83 130 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 RASSF6Q6ZTQ3 369 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 CREB3L2Q70SY1 520 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 AHSA2Q719I0 299 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 SLC35D2Q76EJ3 337 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 ZNF367Q7RTV3 350 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 TMEM179BQ7Z7N9 219 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 LUZP2Q86TE4 346 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 RNF152Q8N8N0 203 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 POC5Q8NA72 575 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 POMGNT2Q8NAT1 580 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 ZNF540Q8NDQ6 660 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 OR2T33Q8NG76 320 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 OR6N1Q8NGY5 312 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 OR6X1Q8NH79 312 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 LILRB4Q8NHJ6 448 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 MOSPD2Q8NHP6 518 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 RHOXF1Q8NHV9 184 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 ITLN2Q8WWU7 325 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-208ENST00000538266 HTRA1Q92743 480 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 STARD4Q96DR4 205 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 LGALS12Q96DT0 336 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 DOCK7Q96N67 2140 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 ERMAPQ96PL5 475 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-208ENST00000538266 ZNF385AQ96PM9 386 aaKnown RBP3.78□□□□□ -1.8
SNHG1-208ENST00000538266 ALKBH3Q96Q83 286 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-208ENST00000538266 TNFRSF13CQ96RJ3 184 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 NIPSNAP1Q9BPW8 284 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 COPS4Q9BT78 406 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 CCDC32Q9BV29 185 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 KATNB1Q9BVA0 655 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 IFT27Q9BW83 186 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 RBM24Q9BX46 236 aaKnown RBP3.78□□□□□ -1.8
SNHG1-208ENST00000538266 PRRG3Q9BZD7 231 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 UCK2Q9BZX2 261 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 C6orf62Q9GZU0 229 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-208ENST00000538266 NXF2Q9GZY0 626 aaKnown RBP3.78□□□□□ -1.8
SNHG1-208ENST00000538266 OPN3Q9H1Y3 402 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-208ENST00000538266 SLCO5A1Q9H2Y9 848 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 OR52D1Q9H346 318 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 TXNIPQ9H3M7 391 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 TPK1Q9H3S4 243 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 MCCC2Q9HCC0 563 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 POLE4Q9NR33 117 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 MED29Q9NX70 200 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 TAS2R5Q9NYW4 299 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 IL20RAQ9UHF4 553 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 ZNF221Q9UK13 617 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 BAIAP2Q9UQB8 552 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 POFUT2Q9Y2G5 429 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 ADAM18Q9Y3Q7 739 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 PEX16Q9Y5Y5 336 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 CDH10Q9Y6N8 788 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 POLEQ07864 2286 aa3.78□□□□□ -1.8
SNHG1-208ENST00000538266 RP1L1Q8IWN7 2480 aaPredicted RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms