RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 MRPS24Q96EL2 167 aaKnown RBP4.83□□□□□ -1.64
LRP6-203ENST00000538239 KIRREL1Q96J84 757 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 OR51J1Q9H342 316 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 MOB1AQ9H8S9 216 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 TMEM165Q9HC07 324 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 ZNF391Q9UJN7 358 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 SLC22A13Q9Y226 551 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 OSGIN2Q9Y236 505 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 SLCO1B1Q9Y6L6 691 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 PLXNA1Q9UIW2 1896 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 KCNE1BA0A087WTH5 132 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 TMEM82A0PJX8 343 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 SLC22A23A1A5C7 686 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 CCL21O00585 134 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 MSTNO14793 375 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 TSPAN15O95858 294 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 CLEC2LP0C7M8 214 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 HTR2AP28223 471 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 FOXL2P58012 376 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 SNRPGP62308 76 aaKnown RBP4.83□□□□□ -1.64
LRP6-203ENST00000538239 RAB35Q15286 201 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 RSPO4Q2I0M5 234 aaPredicted RBP4.83□□□□□ -1.64
LRP6-203ENST00000538239 ISXQ2M1V0 245 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 CLVS2Q5SYC1 327 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 DESI1Q6ICB0 168 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 LPCAT3Q6P1A2 487 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 BHLHA15Q7RTS1 189 aaPredicted RBP4.83□□□□□ -1.64
LRP6-203ENST00000538239 D2HGDHQ8N465 521 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 OR13C5Q8NGS8 318 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 CCL17Q92583 94 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 TMEM43Q9BTV4 400 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 NAA50Q9GZZ1 169 aaKnown RBP4.83□□□□□ -1.64
LRP6-203ENST00000538239 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.83□□□□□ -1.64
LRP6-203ENST00000538239 SLCO1C1Q9NYB5 712 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 TREM2Q9NZC2 230 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 PCP4L1A6NKN8 68 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 PRPH2P23942 346 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 GDNFP39905 211 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 RPS16P62249 146 aaKnown RBP4.83□□□□□ -1.64
LRP6-203ENST00000538239 LRRC10Q5BKY1 277 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 CST9LP1Q5W188 147 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 BRICD5Q6PL45 260 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 FAM198BQ6UWH4 519 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 H2BFWTQ7Z2G1 175 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 FJX1Q86VR8 437 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 SLC22A18ASQ8N1D0 253 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 SLC30A7Q8NEW0 376 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 OR6M1Q8NGM8 313 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 FGF11Q92914 225 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 SLC38A1Q9H2H9 487 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 GLTPQ9NZD2 209 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 R4GMQ9 66 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 NCBP2LA6PVI3 153 aaKnown RBP4.83□□□□□ -1.64
LRP6-203ENST00000538239 CTDSP2O14595 271 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 NDUFB3O43676 98 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 UBBP0CG47 229 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 RAB13P51153 203 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 PLXDC2Q6UX71 529 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 PRSS45Q7RTY3 260 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 OR2T35Q8NGX2 323 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 ELMOD3Q96FG2 381 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 SSX3Q99909 188 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 BCL2L10Q9HD36 194 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 ZNF254O75437 659 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 YIF1AO95070 293 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 GNB3P16520 340 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 ATPAF1Q5TC12 328 aaPredicted RBP4.83□□□□□ -1.64
LRP6-203ENST00000538239 ELP2Q6IA86 826 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 TFAP2EQ6VUC0 442 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 VN1R4Q7Z5H5 301 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 LSRQ86X29 649 aaPredicted RBP4.83□□□□□ -1.64
LRP6-203ENST00000538239 CCDC71Q8IV32 467 aaPredicted RBP4.83□□□□□ -1.64
LRP6-203ENST00000538239 CARFQ8N187 725 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 OR52N1Q8NH53 320 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 MBOAT4Q96T53 435 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 HEYLQ9NQ87 328 aaPredicted RBP4.83□□□□□ -1.64
LRP6-203ENST00000538239 TAAR3PQ9P1P4 343 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 HYAL3O43820 417 aaPredicted RBP4.83□□□□□ -1.64
LRP6-203ENST00000538239 EGR3Q06889 387 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 TMEM108Q6UXF1 575 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 MOB3BQ86TA1 216 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 PTOV1Q86YD1 416 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 LACC1Q8IV20 430 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 TMEM217Q8N7C4 229 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 OR1F12Q8NHA8 337 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 FBXO34Q9NWN3 711 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 CHST2Q9Y4C5 530 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 ETV7Q9Y603 341 aa4.83□□□□□ -1.64
LRP6-203ENST00000538239 ANKRD33BA6NCL7 494 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 C17orf112F2Z3M2 114 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 SFTPCP11686 197 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 CPEP16870 476 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 RAB6AP20340 208 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 ZNF74Q16587 644 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 RTL8BQ17RB0 113 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 HFEQ30201 348 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 PAQR6Q6TCH4 344 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 CATSPERDQ86XM0 798 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 PHC2Q8IXK0 858 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 GABRG1Q8N1C3 465 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms