RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 PCGF3Q3KNV8 242 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 CYB5R2Q6BCY4 276 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 OR2T2Q6IF00 324 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 SLC27A4Q6P1M0 643 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 FAHD1Q6P587 224 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 COLCA1Q6ZS62 124 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 DCXRQ7Z4W1 244 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 AMIGO2Q86SJ2 522 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 OR5AS1Q8N127 324 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 BBS1Q8NFJ9 593 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 OR5K1Q8NHB7 308 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 LRTOMTQ8WZ04 291 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 HAVCR1Q96D42 359 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 MSI2Q96DH6 328 aaKnown RBP11.18□□□□□ -0.62
PRKDC-206ENST00000536429 DCLRE1CQ96SD1 692 aaKnown RBP11.18□□□□□ -0.62
PRKDC-206ENST00000536429 C1QTNF5Q9BXJ0 243 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 OR51V1Q9H2C8 321 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 ZNF556Q9HAH1 456 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 SAP30LQ9HAJ7 183 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 DCAF16Q9NXF7 216 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 KCNG2Q9UJ96 466 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 AP4S1Q9Y587 144 aa11.18□□□□□ -0.62
PRKDC-206ENST00000536429 CHD3Q12873 2000 aaKnown RBP11.18□□□□□ -0.62
PRKDC-206ENST00000536429 IGHV1-69-2A0A0G2JMI3 117 aa11.17□□□□□ -0.62
PRKDC-206ENST00000536429 ZNF593O00488 134 aaPredicted RBP11.17□□□□□ -0.62
PRKDC-206ENST00000536429 TPD52L2O43399 206 aaKnown RBP11.17□□□□□ -0.62
PRKDC-206ENST00000536429 PPIHO43447 177 aaKnown RBP11.17□□□□□ -0.62
PRKDC-206ENST00000536429 TLX2O43763 284 aaPredicted RBP11.17□□□□□ -0.62
PRKDC-206ENST00000536429 CRLF1O75462 422 aa11.17□□□□□ -0.62
PRKDC-206ENST00000536429 MT-ND5P03915 603 aa11.17□□□□□ -0.62
PRKDC-206ENST00000536429 CRYBB2P43320 205 aa11.17□□□□□ -0.62
PRKDC-206ENST00000536429 RGS6P49758 472 aa11.17□□□□□ -0.62
PRKDC-206ENST00000536429 MRPS11P82912 194 aaKnown RBP11.17□□□□□ -0.62
PRKDC-206ENST00000536429 AVPI1Q5T686 147 aa11.17□□□□□ -0.62
PRKDC-206ENST00000536429 PLBD1Q6P4A8 553 aa11.17□□□□□ -0.62
PRKDC-206ENST00000536429 FBXW12Q6X9E4 464 aa11.17□□□□□ -0.62
PRKDC-206ENST00000536429 SPATC1Q76KD6 591 aa11.17□□□□□ -0.62
PRKDC-206ENST00000536429 PRIMA1Q86XR5 153 aa11.17□□□□□ -0.62
PRKDC-206ENST00000536429 CLDND2Q8NHS1 167 aa11.17□□□□□ -0.62
PRKDC-206ENST00000536429 ST7LQ8TDW4 575 aa11.17□□□□□ -0.62
PRKDC-206ENST00000536429 APOBEC3DQ96AK3 386 aaPredicted RBP11.17□□□□□ -0.62
PRKDC-206ENST00000536429 ZMYND19Q96E35 227 aaPredicted RBP11.17□□□□□ -0.62
PRKDC-206ENST00000536429 NRBF2Q96F24 287 aa11.17□□□□□ -0.62
PRKDC-206ENST00000536429 DUS3LQ96G46 650 aaKnown RBP11.17□□□□□ -0.62
PRKDC-206ENST00000536429 AMELYQ99218 206 aa11.17□□□□□ -0.62
PRKDC-206ENST00000536429 SLC25A19Q9HC21 320 aa11.17□□□□□ -0.62
PRKDC-206ENST00000536429 PAPOLBQ9NRJ5 636 aaKnown RBP11.17□□□□□ -0.62
PRKDC-206ENST00000536429 DECR2Q9NUI1 292 aa11.17□□□□□ -0.62
PRKDC-206ENST00000536429 DDX28Q9NUL7 540 aaKnown RBP11.17□□□□□ -0.62
PRKDC-206ENST00000536429 A8MV72 311 aaPredicted RBP11.16□□□□□ -0.62
PRKDC-206ENST00000536429 M0R129 80 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 M0R135 149 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 GLCEO94923 617 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 LCATP04180 440 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 ADH4P08319 380 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 RAC2P15153 192 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 TUBG1P23258 451 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 FASP25445 335 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 EPHA2P29317 976 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 GSTT1P30711 240 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 GZMKP49863 264 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 CHN2P52757 468 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 TMEM33P57088 247 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 ECH1Q13011 328 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 CDK5R2Q13319 367 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 SNAI3Q3KNW1 292 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 TEX30Q5JUR7 227 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 FAM209AQ5JX71 171 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 CCDC121Q6ZUS5 278 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 DPY19L4Q7Z388 723 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 ERI1Q8IV48 349 aaKnown RBP11.16□□□□□ -0.62
PRKDC-206ENST00000536429 CPOQ8IVL8 374 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 TIGD4Q8IY51 512 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 SLAMF6Q96DU3 332 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 ZNF799Q96GE5 643 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 SEMA6AQ9H2E6 1030 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 TUBG2Q9NRH3 451 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 CYSLTR2Q9NS75 346 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 KIF17Q9P2E2 1029 aa11.16□□□□□ -0.62
PRKDC-206ENST00000536429 LOC100289279A0A1B0GTE1 492 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 PRR23D1E9PI22 279 aaPredicted RBP11.15□□□□□ -0.62
PRKDC-206ENST00000536429 G3V2T6 193 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 H0YL77 283 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 J3QW42 95 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 SELENOFO60613 162 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 CIB2O75838 187 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 HMGN1P05114 100 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 CD55P08174 381 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 PRR23D2P0DMB1 279 aaPredicted RBP11.15□□□□□ -0.62
PRKDC-206ENST00000536429 SLC2A1P11166 492 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 IGFBP5P24593 272 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 OTX1P32242 354 aaPredicted RBP11.15□□□□□ -0.62
PRKDC-206ENST00000536429 LIPAP38571 399 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 PRKXP51817 358 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 CRISP1P54107 249 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 TPTEP56180 551 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 TNFAIP6P98066 277 aaPredicted RBP11.15□□□□□ -0.62
PRKDC-206ENST00000536429 MVKQ03426 396 aa11.15□□□□□ -0.62
PRKDC-206ENST00000536429 GK2Q14410 553 aaPredicted RBP11.15□□□□□ -0.62
PRKDC-206ENST00000536429 KPNB1Q14974 876 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms