RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 MDFIQ99750 246 aa12.1□□□□□ -0.47
UBE3B-206ENST00000536398 ATF6BQ99941 703 aa12.1□□□□□ -0.47
UBE3B-206ENST00000536398 CYSLTR2Q9NS75 346 aa12.1□□□□□ -0.47
UBE3B-206ENST00000536398 ATPIF1Q9UII2 106 aa12.1□□□□□ -0.47
UBE3B-206ENST00000536398 KCNS2Q9ULS6 477 aa12.1□□□□□ -0.47
UBE3B-206ENST00000536398 BAIAP2Q9UQB8 552 aa12.1□□□□□ -0.47
UBE3B-206ENST00000536398 C5orf63A6NC05 138 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 ARRDC5A6NEK1 342 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 H3BN98 237 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 E2F6O75461 281 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 TIPRLO75663 272 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 TUBG1P23258 451 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 LIPAP38571 399 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 SLC25A1P53007 311 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 CDH15P55291 814 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 LMO4P61968 165 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 TNFAIP6P98066 277 aaPredicted RBP12.09□□□□□ -0.47
UBE3B-206ENST00000536398 FAM209AQ5JX71 171 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 FAM120AOSQ5T036 256 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 LINC01590Q5TEZ4 76 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 COLCA1Q6ZS62 124 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 ZNF771Q7L3S4 317 aaPredicted RBP12.09□□□□□ -0.47
UBE3B-206ENST00000536398 LINC01356Q8N9X3 169 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 OR2Z1Q8NG97 314 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 TEX47Q8TBZ9 253 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 APOBEC3DQ96AK3 386 aaPredicted RBP12.09□□□□□ -0.47
UBE3B-206ENST00000536398 BEX2Q9BXY8 128 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 LPAR2Q9HBW0 351 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 TUBG2Q9NRH3 451 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 CMC2Q9NRP2 79 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 TMEM160Q9NX00 188 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 DNAJB9Q9UBS3 223 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 ZDHHC8Q9ULC8 765 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 COMMD3-BMI1R4GMX3 469 aa12.09□□□□□ -0.47
UBE3B-206ENST00000536398 RIIAD1A6NNX1 92 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 ZNF593O00488 134 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-206ENST00000536398 CD55P08174 381 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 ADH4P08319 380 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 SPARCP09486 303 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 RAC2P15153 192 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 GRK5P34947 590 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 RGS6P49758 472 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 GK3PQ14409 553 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 GINS1Q14691 196 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 CR1LQ2VPA4 569 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 HFEQ30201 348 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 FBXW12Q6X9E4 464 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 SPATC1Q76KD6 591 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 DCXRQ7Z4W1 244 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 OR6K6Q8NGW6 343 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 ITLN1Q8WWA0 313 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 OTULINQ96BN8 352 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 ELMOD3Q96FG2 381 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 C1QTNF5Q9BXJ0 243 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 EGLN1Q9GZT9 426 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 SHARPINQ9H0F6 387 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 CDC42EP3Q9UKI2 254 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 WIPI2Q9Y4P8 454 aa12.08□□□□□ -0.48
UBE3B-206ENST00000536398 FBN1P35555 2871 aaKnown RBP12.07□□□□□ -0.48
UBE3B-206ENST00000536398 H0YL77 283 aa12.07□□□□□ -0.48
UBE3B-206ENST00000536398 IFNGP01579 166 aa12.07□□□□□ -0.48
UBE3B-206ENST00000536398 LCATP04180 440 aa12.07□□□□□ -0.48
UBE3B-206ENST00000536398 OSMP13725 252 aa12.07□□□□□ -0.48
UBE3B-206ENST00000536398 ZNF3P17036 446 aa12.07□□□□□ -0.48
UBE3B-206ENST00000536398 FMO3P31513 532 aa12.07□□□□□ -0.48
UBE3B-206ENST00000536398 ENTPD1P49961 510 aa12.07□□□□□ -0.48
UBE3B-206ENST00000536398 ECH1Q13011 328 aa12.07□□□□□ -0.48
UBE3B-206ENST00000536398 PCK2Q16822 640 aa12.07□□□□□ -0.48
UBE3B-206ENST00000536398 TMEM236Q5W0B7 351 aa12.07□□□□□ -0.48
UBE3B-206ENST00000536398 ATG16L2Q8NAA4 619 aa12.07□□□□□ -0.48
UBE3B-206ENST00000536398 BHLHE23Q8NDY6 225 aa12.07□□□□□ -0.48
UBE3B-206ENST00000536398 OR5L1Q8NGL2 311 aa12.07□□□□□ -0.48
UBE3B-206ENST00000536398 UTP4Q969X6 686 aaKnown RBP12.07□□□□□ -0.48
UBE3B-206ENST00000536398 COG8Q96MW5 612 aa12.07□□□□□ -0.48
UBE3B-206ENST00000536398 YY1AP1Q9H869 796 aa12.07□□□□□ -0.48
UBE3B-206ENST00000536398 CGGBP1Q9UFW8 167 aaPredicted RBP12.07□□□□□ -0.48
UBE3B-206ENST00000536398 KCNG2Q9UJ96 466 aa12.07□□□□□ -0.48
UBE3B-206ENST00000536398 IGHV3-64DA0A0J9YX35 117 aa12.06□□□□□ -0.48
UBE3B-206ENST00000536398 CLDN25C9JDP6 229 aa12.06□□□□□ -0.48
UBE3B-206ENST00000536398 J3QW42 95 aa12.06□□□□□ -0.48
UBE3B-206ENST00000536398 M0R135 149 aa12.06□□□□□ -0.48
UBE3B-206ENST00000536398 FAM157CP0CG43 387 aa12.06□□□□□ -0.48
UBE3B-206ENST00000536398 SLC2A1P11166 492 aa12.06□□□□□ -0.48
UBE3B-206ENST00000536398 CDK5Q00535 292 aa12.06□□□□□ -0.48
UBE3B-206ENST00000536398 GK2Q14410 553 aaPredicted RBP12.06□□□□□ -0.48
UBE3B-206ENST00000536398 SNAI3Q3KNW1 292 aa12.06□□□□□ -0.48
UBE3B-206ENST00000536398 ZMAT1Q5H9K5 638 aa12.06□□□□□ -0.48
UBE3B-206ENST00000536398 SLC27A4Q6P1M0 643 aa12.06□□□□□ -0.48
UBE3B-206ENST00000536398 PLBD1Q6P4A8 553 aa12.06□□□□□ -0.48
UBE3B-206ENST00000536398 SHQ1Q6PI26 577 aaKnown RBP12.06□□□□□ -0.48
UBE3B-206ENST00000536398 OR8G5Q8NG78 346 aa12.06□□□□□ -0.48
UBE3B-206ENST00000536398 OR10AD1Q8NGE0 317 aa12.06□□□□□ -0.48
UBE3B-206ENST00000536398 ST7LQ8TDW4 575 aa12.06□□□□□ -0.48
UBE3B-206ENST00000536398 ZNF799Q96GE5 643 aa12.06□□□□□ -0.48
UBE3B-206ENST00000536398 DIRC2Q96SL1 478 aa12.06□□□□□ -0.48
UBE3B-206ENST00000536398 OR51V1Q9H2C8 321 aa12.06□□□□□ -0.48
UBE3B-206ENST00000536398 ZNF556Q9HAH1 456 aa12.06□□□□□ -0.48
UBE3B-206ENST00000536398 CENPMQ9NSP4 180 aa12.06□□□□□ -0.48
UBE3B-206ENST00000536398 DDX28Q9NUL7 540 aaKnown RBP12.06□□□□□ -0.48
UBE3B-206ENST00000536398 N6AMT1Q9Y5N5 214 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms