RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 TRAV14DV4A0A0A6YYC5 116 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 A0A0B4J203 849 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 A0A1W2PPK0 400 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 ZNF736B4DX44 427 aaPredicted RBP5.89□□□□□ -1.47
USP28-202ENST00000535607 RNASEK-C17orf49H0YIS7 233 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 ADAM10O14672 748 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 TGOLN2O43493 480 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 GMFGO60234 142 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 PIP5K1CO60331 668 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 B4GALT2O60909 372 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 MTX2O75431 263 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 SLC25A12O75746 678 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 PPP1R3DO95685 299 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 EPPINO95925 133 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 IGHV2-70P01814 119 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 HLA-AP01891 365 aaKnown RBP5.89□□□□□ -1.47
USP28-202ENST00000535607 IFI6P09912 130 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 EGR2P11161 476 aaPredicted RBP5.89□□□□□ -1.47
USP28-202ENST00000535607 RCC1P18754 421 aaPredicted RBP5.89□□□□□ -1.47
USP28-202ENST00000535607 ZNF10P21506 573 aaPredicted RBP5.89□□□□□ -1.47
USP28-202ENST00000535607 MPZP25189 248 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 PSMB6P28072 239 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 TLX1P31314 330 aaPredicted RBP5.89□□□□□ -1.47
USP28-202ENST00000535607 MAGEB1P43366 347 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 RABIFP47224 123 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 DVL1P1P54792 670 aaPredicted RBP5.89□□□□□ -1.47
USP28-202ENST00000535607 F2RL1P55085 397 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 BIKQ13323 160 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 CRMP1Q14194 572 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 RHEBQ15382 184 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 OR1Q1Q15612 314 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 ZNF805Q5CZA5 627 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 FAM74A1Q5RGS3 127 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 DCAF12L2Q5VW00 463 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 SLC48A1Q6P1K1 146 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 VWA1Q6PCB0 445 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 STAC2Q6ZMT1 411 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 DPY19L2P2Q6ZN68 376 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 HSD11B1LQ7Z5J1 315 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 TMED4Q7Z7H5 227 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 LYG2Q86SG7 212 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 DTX2Q86UW9 622 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 AMZ2Q86W34 360 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 MEX3DQ86XN8 651 aaKnown RBP5.89□□□□□ -1.47
USP28-202ENST00000535607 ANGPTL5Q86XS5 388 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 ZNF584Q8IVC4 421 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 GABRG1Q8N1C3 465 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 WFDC5Q8TCV5 224 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 RPS4Y2Q8TD47 263 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 C2CD4CQ8TF44 421 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 HMGB4Q8WW32 186 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 VOPP1Q96AW1 172 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 RAB3CQ96E17 227 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 MALSU1Q96EH3 234 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 C14orf79Q96F83 325 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 PIK3IP1Q96FE7 263 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 OR5B2Q96R09 309 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 CCNL2Q96S94 520 aaPredicted RBP5.89□□□□□ -1.47
USP28-202ENST00000535607 MAP3K3Q99759 626 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 MICU1Q9BPX6 476 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 NRIP2Q9BQI9 281 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 MLST8Q9BVC4 326 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 PBDC1Q9BVG4 233 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 PAPOLGQ9BWT3 736 aaKnown RBP5.89□□□□□ -1.47
USP28-202ENST00000535607 KRTAP9-2Q9BYQ4 174 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 SLC17A9Q9BYT1 436 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 NMES1Q9C002 83 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 TOLLIPQ9H0E2 274 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 ATG5Q9H1Y0 275 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 LINC00597Q9H2U6 94 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 RGCCQ9H4X1 137 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 RHOFQ9HBH0 211 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 MKKSQ9NPJ1 570 aaPredicted RBP5.89□□□□□ -1.47
USP28-202ENST00000535607 POT1Q9NUX5 634 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 DCAF16Q9NXF7 216 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 PPP1R14DQ9NXH3 145 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 TREM2Q9NZC2 230 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 LRFN1Q9P244 771 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 RCC2Q9P258 522 aaKnown RBP5.89□□□□□ -1.47
USP28-202ENST00000535607 IL20RAQ9UHF4 553 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 SPACA6W5XKT8 324 aa5.89□□□□□ -1.47
USP28-202ENST00000535607 COL6A3P12111 3177 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 TICRRQ7Z2Z1 1910 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 A0A0B4J2A0 478 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 C5orf51A6NDU8 294 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 TMEM202A6NGA9 273 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 COLCA2A8K830 154 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 TSTD3H0UI37 97 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 SULT2B1O00204 365 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 CDC42EP2O14613 210 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 PRRG2O14669 202 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 TMPRSS11DO60235 418 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 GLCEO94923 617 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 FARS2O95363 451 aaKnown RBP5.88□□□□□ -1.47
USP28-202ENST00000535607 IFNA6P05013 189 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 APODP05090 189 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 CD14P08571 375 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 SFTA3P0C7M3 94 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 ERGP11308 486 aa5.88□□□□□ -1.47
USP28-202ENST00000535607 NDUFB7P17568 137 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms