RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 CALM3P0DP25 149 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 ATF6P18850 670 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 MAS1LP35410 378 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 PRR3P79522 188 aaKnown RBP2.58□□□□□ -2
PRKDC-205ENST00000535375 POU2AF1Q16633 256 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 HADHQ16836 314 aaKnown RBP2.58□□□□□ -2
PRKDC-205ENST00000535375 DNLZQ5SXM8 178 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 CCNJQ5T5M9 372 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 NPSR1Q6W5P4 371 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 MBOAT1Q6ZNC8 495 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 FAM122BQ7Z309 247 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 RIMKLAQ8IXN7 391 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 NPWQ8N729 165 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 NOXO1Q8NFA2 376 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 CREB3L1Q96BA8 519 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 GALNT14Q96FL9 552 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 CHAC1Q9BUX1 264 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 TMEM38AQ9H6F2 299 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 C8orf33Q9H7E9 229 aaPredicted RBP2.58□□□□□ -2
PRKDC-205ENST00000535375 FANCEQ9HB96 536 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 HMG20AQ9NP66 347 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 ACP6Q9NPH0 428 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 KCNJ16Q9NPI9 418 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 MYEF2Q9P2K5 600 aaKnown RBP2.58□□□□□ -2
PRKDC-205ENST00000535375 RHBDD3Q9Y3P4 386 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 SAR1BQ9Y6B6 198 aa2.58□□□□□ -2
PRKDC-205ENST00000535375 A0A1B0GW55 424 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 GABRR3A8MPY1 467 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 H0YC42 278 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 RPL36A-HNRNPH2H7BZ11 118 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 H7C0C1 242 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 RAD51CO43502 376 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 FLOT1O75955 427 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 MPZL1O95297 269 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 HBE1P02100 147 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 ARG1P05089 322 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 CLTAP09496 248 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 DUX4L2P0CJ85 424 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 DUX4L3P0CJ86 424 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 DUX4L5P0CJ88 424 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 DUX4L6P0CJ89 424 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 DUX4L7P0CJ90 424 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 IGHV1-8P0DP01 117 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 RNASE2P10153 161 aaKnown RBP2.57□□□□□ -2
PRKDC-205ENST00000535375 SRMP19623 302 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 CPN2P22792 545 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 F2RP25116 425 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 PEX19P40855 299 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 SEMG2Q02383 582 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 NKAIN1Q4KMZ8 207 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 ZNF684Q5T5D7 378 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 ZFP41Q8N8Y5 198 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 LRRC75AQ8NAA5 344 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 OR52K1Q8NGK4 314 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 MRGPRFQ96AM1 343 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 BLZF1Q9H2G9 400 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 CYP3A43Q9HB55 503 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 TMEM9BQ9NQ34 198 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 DUX4Q9UBX2 424 aa2.57□□□□□ -2
PRKDC-205ENST00000535375 A0A1W2PRD5 423 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 SLC9A3R1O14745 358 aaPredicted RBP2.56□□□□□ -2
PRKDC-205ENST00000535375 SNAI1O95863 264 aaPredicted RBP2.56□□□□□ -2
PRKDC-205ENST00000535375 IFNW1P05000 195 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 CRYGCP07315 174 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 LINC00869P0C866 280 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 RAB3BP20337 219 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 RAB4AP20338 218 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 CD82P27701 267 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 SLC1A2P43004 574 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 RPS15AP62244 130 aaKnown RBP2.56□□□□□ -2
PRKDC-205ENST00000535375 ESRRGP62508 458 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 SYCNQ0VAF6 134 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 PSMD5Q16401 504 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 ZSCAN26Q16670 478 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 RPEL1Q2QD12 228 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 TTC19Q6DKK2 380 aaPredicted RBP2.56□□□□□ -2
PRKDC-205ENST00000535375 H3F3CQ6NXT2 135 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 FBXW12Q6X9E4 464 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 NCCRP1Q6ZVX7 275 aaPredicted RBP2.56□□□□□ -2
PRKDC-205ENST00000535375 OAFQ86UD1 273 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 ZNF321PQ8N8H1 164 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 NAT6Q93015 286 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 TOP1MTQ969P6 601 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 TM4SF18Q96CE8 201 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 ECHDC3Q96DC8 303 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 RBMXL1Q96E39 390 aaKnown RBP2.56□□□□□ -2
PRKDC-205ENST00000535375 C9orf72Q96LT7 481 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 IL22Q9GZX6 179 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 PARP12Q9H0J9 701 aaKnown RBP2.56□□□□□ -2
PRKDC-205ENST00000535375 RGCCQ9H4X1 137 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 ISYNA1Q9NPH2 558 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 PXMP2Q9NR77 195 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 UBN2Q6ZU65 1347 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 CAMTA1Q9Y6Y1 1673 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 HIVEP2P31629 2446 aa2.56□□□□□ -2
PRKDC-205ENST00000535375 IGLV3-12A0A075B6K2 115 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 IGHV3-74A0A0B4J1X5 117 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 IGHV5-10-1A0A0J9YXX1 117 aa2.55□□□□□ -2
PRKDC-205ENST00000535375 TSPAN11A1L157 253 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms