RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 TSPAN31Q12999 210 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 ECH1Q13011 328 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 SLC36A3Q495N2 470 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 SLC35F1Q5T1Q4 408 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 COLCA1Q6ZS62 124 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 NAA40Q86UY6 237 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 ZBTB46Q86UZ6 589 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 LINC00346Q8IVM7 164 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 BPIFB2Q8N4F0 458 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 ZNF454Q8N9F8 522 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 BHLHE23Q8NDY6 225 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 DEFB108BQ8NET1 73 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 OR10AD1Q8NGE0 317 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 GNPDA2Q8TDQ7 276 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 FAM216AQ8WUB2 273 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 GCDHQ92947 438 aaPredicted RBP7.5□□□□□ -1.21
COPB1-211ENST00000534234 PITX2Q99697 317 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 SLC6A7Q99884 636 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 WDR76Q9H967 626 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 ARL8BQ9NVJ2 186 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 TAGLN3Q9UI15 199 aa7.5□□□□□ -1.21
COPB1-211ENST00000534234 IGHV3-64DA0A0J9YX35 117 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 IFNL4K9M1U5 179 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 KRT36O76013 467 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 ZNF205O95201 554 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 FSHBP01225 129 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 CFPP27918 469 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 GSSP48637 474 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 MMP16P51512 607 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 HMGA2P52926 109 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 GYS2P54840 703 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 SEC61A1P61619 476 aaKnown RBP7.49□□□□□ -1.21
COPB1-211ENST00000534234 MXRA7P84157 204 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 ZNF154Q13106 437 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 ESCO2Q56NI9 601 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 CLEC12AQ5QGZ9 265 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 SLC18B1Q6NT16 456 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 CFAP77Q6ZQR2 320 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 ZDHHC21Q8IVQ6 265 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 DEFB107AQ8IZN7 70 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 MUC20Q8N307 709 aaPredicted RBP7.49□□□□□ -1.21
COPB1-211ENST00000534234 SDR9C7Q8NEX9 313 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 OR52E2Q8NGJ4 325 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 ZNF420Q8TAQ5 688 aaPredicted RBP7.49□□□□□ -1.21
COPB1-211ENST00000534234 MEGF10Q96KG7 1140 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 SLC30A2Q9BRI3 323 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 RBM4Q9BWF3 364 aaKnown RBP7.49□□□□□ -1.21
COPB1-211ENST00000534234 HCAR1Q9BXC0 346 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 C1QTNF5Q9BXJ0 243 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 FN3KQ9H479 309 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 TMEM165Q9HC07 324 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 TMEM100Q9NV29 134 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 CYB5R1Q9UHQ9 305 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 ARL2BPQ9Y2Y0 163 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 POLR3KQ9Y2Y1 108 aaPredicted RBP7.49□□□□□ -1.21
COPB1-211ENST00000534234 AUP1Q9Y679 476 aa7.49□□□□□ -1.21
COPB1-211ENST00000534234 TMEM89A2RUT3 159 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 CEACAM18A8MTB9 384 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 IQCF6A8MYZ5 107 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 F5H5P2 479 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 MLNRO43193 412 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 CYB5R3P00387 301 aaPredicted RBP7.48□□□□□ -1.21
COPB1-211ENST00000534234 LCATP04180 440 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 HLA-DPB1P04440 258 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 WNT2P09544 360 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 ACSM4P0C7M7 580 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 ZNF823P16415 610 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 SELEP16581 610 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 ZNF12P17014 697 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 GGT2P36268 569 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 TPTEP56180 551 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 PRSS12P56730 875 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.48□□□□□ -1.21
COPB1-211ENST00000534234 MALLQ13021 153 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 GK2Q14410 553 aaPredicted RBP7.48□□□□□ -1.21
COPB1-211ENST00000534234 KRTAP27-1Q3LI81 207 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 SPATS1Q496A3 300 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 PGBD2Q6P3X8 592 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 C16orf89Q6UX73 402 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 CYP2R1Q6VVX0 501 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 RBMS3Q6XE24 437 aaKnown RBP7.48□□□□□ -1.21
COPB1-211ENST00000534234 ZNF620Q6ZNG0 422 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 PIGWQ7Z7B1 504 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 MOGAT3Q86VF5 341 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 C3orf56Q8N813 242 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 ZDHHC22Q8N966 263 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 DVL3Q92997 716 aaPredicted RBP7.48□□□□□ -1.21
COPB1-211ENST00000534234 POP5Q969H6 163 aaKnown RBP7.48□□□□□ -1.21
COPB1-211ENST00000534234 SLCO4A1Q96BD0 722 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 ATF6BQ99941 703 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 EGLN3Q9H6Z9 239 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 NTN4Q9HB63 628 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 DDX28Q9NUL7 540 aaKnown RBP7.48□□□□□ -1.21
COPB1-211ENST00000534234 MRPL22Q9NWU5 206 aaKnown RBP7.48□□□□□ -1.21
COPB1-211ENST00000534234 NDE1Q9NXR1 346 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 INSIG2Q9Y5U4 225 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 NBEAL1Q6ZS30 2694 aa7.48□□□□□ -1.21
COPB1-211ENST00000534234 LRRC30A6NM36 301 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 A8MXK9 166 aa7.47□□□□□ -1.21
COPB1-211ENST00000534234 F5H0A9 414 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms