RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 SLC6A1P30531 599 aa8.39□□□□□ -1.07
CSDE1-215ENST00000533818 PHBP35232 272 aa8.39□□□□□ -1.07
CSDE1-215ENST00000533818 CEBPDP49716 269 aaPredicted RBP8.39□□□□□ -1.07
CSDE1-215ENST00000533818 ZNF133P52736 654 aaPredicted RBP8.39□□□□□ -1.07
CSDE1-215ENST00000533818 IKZF1Q13422 519 aa8.39□□□□□ -1.07
CSDE1-215ENST00000533818 SELPLGQ14242 412 aa8.39□□□□□ -1.07
CSDE1-215ENST00000533818 MAPK11Q15759 364 aa8.39□□□□□ -1.07
CSDE1-215ENST00000533818 OR5L1Q8NGL2 311 aa8.39□□□□□ -1.07
CSDE1-215ENST00000533818 OR5M8Q8NGP6 311 aa8.39□□□□□ -1.07
CSDE1-215ENST00000533818 ITCHQ96J02 903 aa8.39□□□□□ -1.07
CSDE1-215ENST00000533818 SEPHS2Q99611 448 aa8.39□□□□□ -1.07
CSDE1-215ENST00000533818 SELENONQ9NZV5 590 aa8.39□□□□□ -1.07
CSDE1-215ENST00000533818 HERC1Q15751 4861 aa8.39□□□□□ -1.07
CSDE1-215ENST00000533818 A0A1W2PQ09 198 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 MCIDASD6RGH6 385 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 CCL24O00175 119 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 TRMUO75648 421 aaKnown RBP8.38□□□□□ -1.07
CSDE1-215ENST00000533818 IFNA6P05013 189 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 LPLP06858 475 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 MYL2P10916 166 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 ACADSP16219 412 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 HTR2AP28223 471 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 ELF3P78545 371 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-215ENST00000533818 TXNL4AP83876 142 aaKnown RBP8.38□□□□□ -1.07
CSDE1-215ENST00000533818 SLC7A5Q01650 507 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 LRRC10Q5BKY1 277 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 BEND6Q5SZJ8 279 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-215ENST00000533818 SLC36A1Q7Z2H8 476 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 LCA5Q86VQ0 697 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 SLC30A8Q8IWU4 369 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 DYNAPQ8N1N2 210 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 FAM216BQ8N7L0 139 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 FNDC5Q8NAU1 212 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 PCYOX1LQ8NBM8 494 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 SPC24Q8NBT2 197 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 KLHL30-AS1Q8NEE0 82 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 SLC26A10Q8NG04 563 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 OR8J2Q8NGG1 315 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 SLC35B4Q969S0 331 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 RASD2Q96D21 266 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 DUS3LQ96G46 650 aaKnown RBP8.38□□□□□ -1.07
CSDE1-215ENST00000533818 PAFAH2Q99487 392 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 NAPGQ99747 312 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-215ENST00000533818 SMURF2Q9HAU4 748 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 C1orf123Q9NWV4 160 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 CALML5Q9NZT1 146 aa8.38□□□□□ -1.07
CSDE1-215ENST00000533818 IGKV1D-43A0A0B4J1Z2 117 aa8.37□□□□□ -1.07
CSDE1-215ENST00000533818 C12orf71A8MTZ7 269 aa8.37□□□□□ -1.07
CSDE1-215ENST00000533818 CENPBD1B2RD01 187 aa8.37□□□□□ -1.07
CSDE1-215ENST00000533818 G3V2L1 256 aa8.37□□□□□ -1.07
CSDE1-215ENST00000533818 SNRPAP09012 282 aaKnown RBP8.37□□□□□ -1.07
CSDE1-215ENST00000533818 POU1F1P28069 291 aa8.37□□□□□ -1.07
CSDE1-215ENST00000533818 GUCA1AP43080 201 aaPredicted RBP8.37□□□□□ -1.07
CSDE1-215ENST00000533818 CLDN8P56748 225 aa8.37□□□□□ -1.07
CSDE1-215ENST00000533818 ERVFRD-1P60508 538 aa8.37□□□□□ -1.07
CSDE1-215ENST00000533818 CAV1Q03135 178 aa8.37□□□□□ -1.07
CSDE1-215ENST00000533818 FMODQ06828 376 aa8.37□□□□□ -1.07
CSDE1-215ENST00000533818 MICBQ29980 383 aa8.37□□□□□ -1.07
CSDE1-215ENST00000533818 ZNF260Q3ZCT1 412 aa8.37□□□□□ -1.07
CSDE1-215ENST00000533818 RPS26P11Q5JNZ5 115 aaPredicted RBP8.37□□□□□ -1.07
CSDE1-215ENST00000533818 WDR38Q5JTN6 314 aa8.37□□□□□ -1.07
CSDE1-215ENST00000533818 C6orf136Q5SQH8 315 aa8.37□□□□□ -1.07
CSDE1-215ENST00000533818 ANXA8L1Q5VT79 327 aa8.37□□□□□ -1.07
CSDE1-215ENST00000533818 TEX36Q5VZQ5 186 aa8.37□□□□□ -1.07
CSDE1-215ENST00000533818 KANK2Q63ZY3 851 aa8.37□□□□□ -1.07
CSDE1-215ENST00000533818 FAM91A1Q658Y4 838 aa8.37□□□□□ -1.07
CSDE1-215ENST00000533818 ZYG11AQ6WRX3 759 aa8.37□□□□□ -1.07
CSDE1-215ENST00000533818 LHFPL4Q7Z7J7 247 aa8.37□□□□□ -1.07
CSDE1-215ENST00000533818 TWIST2Q8WVJ9 160 aa8.37□□□□□ -1.07
CSDE1-215ENST00000533818 SLC7A6Q92536 515 aa8.37□□□□□ -1.07
CSDE1-215ENST00000533818 IFT52Q9Y366 437 aa8.37□□□□□ -1.07
CSDE1-215ENST00000533818 hCG_1807616A0A1W2PRN6 198 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 H3BUI4 141 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 DOK2O60496 412 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 CH25HO95992 272 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 HIST1H2ABP04908 130 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 CRISP3P54108 245 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 ENDOGQ14249 297 aaKnown RBP8.36□□□□□ -1.07
CSDE1-215ENST00000533818 OR8G1Q15617 311 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 FAM27D1Q5T7N8 215 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 ZNF826PQ6ZT77 177 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 HIST3H2AQ7L7L0 130 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 SYT9Q86SS6 491 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 ARMC8Q8IUR7 673 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 OSR2Q8N2R0 312 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 SLC35F6Q8N357 371 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 GCSAMQ8N6F7 178 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 PLPP7Q8NBV4 271 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 ASB10Q8WXI3 467 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 ACOT11Q8WXI4 607 aaPredicted RBP8.36□□□□□ -1.07
CSDE1-215ENST00000533818 HIST1H2ACQ93077 130 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 RAX2Q96IS3 184 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 SPATA25Q9BR10 227 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 TMEM43Q9BTV4 400 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 HCAR1Q9BXC0 346 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 NUF2Q9BZD4 464 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 HEXA-AS1Q9H8Q6 139 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 WDR76Q9H967 626 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 ZFP57Q9NU63 452 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 VNN3Q9NY84 501 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms