RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 CORO6Q6QEF8 472 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 PGAM4Q8N0Y7 254 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 OR5AS1Q8N127 324 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 MUC20Q8N307 709 aaPredicted RBP10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 OR2AJ1Q8NGZ0 328 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 OR4K13Q8NH42 304 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 GNPDA2Q8TDQ7 276 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 GCDHQ92947 438 aaPredicted RBP10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 PITX2Q99697 317 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 RBM4Q9BWF3 364 aaKnown RBP10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 HCAR1Q9BXC0 346 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 NTN4Q9HB63 628 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 PATZ1Q9HBE1 687 aaKnown RBP10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 GCM1Q9NP62 436 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 IL1RAPQ9NPH3 570 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 DCAF16Q9NXF7 216 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 NDE1Q9NXR1 346 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 PTTG3PQ9NZH4 202 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 CD300AQ9UGN4 299 aa10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 POLR3KQ9Y2Y1 108 aaPredicted RBP10.46□□□□□ -0.73
CAPRIN1-213ENST00000533562 TANC2Q9HCD6 1990 aa10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 LRRC30A6NM36 301 aa10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 TMEM178BH3BS89 294 aa10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 GPANK1O95872 356 aa10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 SEMG1P04279 462 aa10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 HIST1H1CP16403 213 aaKnown RBP10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 RRM2P31350 389 aa10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 MSX2P35548 267 aaPredicted RBP10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 ERFP50548 548 aa10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 TSPAN31Q12999 210 aa10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 MALLQ13021 153 aa10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 ZMYND11Q15326 602 aa10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 C16orf89Q6UX73 402 aa10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 RBMS3Q6XE24 437 aaKnown RBP10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 ZBTB46Q86UZ6 589 aa10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 LINC00471Q8N535 108 aa10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 SLC26A10Q8NG04 563 aa10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 POP5Q969H6 163 aaKnown RBP10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 SLC30A2Q9BRI3 323 aa10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 C1QTNF5Q9BXJ0 243 aa10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 RPRD1BQ9NQG5 326 aaKnown RBP10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 TMEM100Q9NV29 134 aa10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 OPN4Q9UHM6 478 aa10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 TAGLN3Q9UI15 199 aa10.45□□□□□ -0.74
CAPRIN1-213ENST00000533562 OR6C68A6NDL8 312 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 IQCF6A8MYZ5 107 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 F5H5K5 113 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 ARPC2O15144 300 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 ZNF823P16415 610 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 GSSP48637 474 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 COMPP49747 757 aaPredicted RBP10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 MNAT1P51948 309 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 RSPO1Q2MKA7 263 aaPredicted RBP10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 ESCO2Q56NI9 601 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 SLC18B1Q6NT16 456 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 RPL13AP3Q6NVV1 102 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 COLCA1Q6ZS62 124 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 ZDHHC21Q8IVQ6 265 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 C1orf87Q8N0U7 546 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 OR10AD1Q8NGE0 317 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 OR52E2Q8NGJ4 325 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 MEGF10Q96KG7 1140 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 SIGLEC11Q96RL6 698 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 SLC6A7Q99884 636 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 ATF6BQ99941 703 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 MRI1Q9BV20 369 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 MMP26Q9NRE1 261 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 DDX28Q9NUL7 540 aaKnown RBP10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 CYB5R1Q9UHQ9 305 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 KCNG2Q9UJ96 466 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 ARL2BPQ9Y2Y0 163 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 AUP1Q9Y679 476 aa10.44□□□□□ -0.74
CAPRIN1-213ENST00000533562 TMEM89A2RUT3 159 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 TRAPPC2LH3BP13 241 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 DCTN3O75935 186 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 FSHBP01225 129 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 LCATP04180 440 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 WNT2P09544 360 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 ACSM4P0C7M7 580 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 CFPP27918 469 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 MMP16P51512 607 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 HMGA2P52926 109 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 TPTEP56180 551 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 MXRA7P84157 204 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 ZNF154Q13106 437 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 HNRNPA0Q13151 305 aaKnown RBP10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 KRTAP27-1Q3LI81 207 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 ARMCX4Q5H9R4 360 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 SLC35F1Q5T1Q4 408 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 ZNF620Q6ZNG0 422 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 CFAP77Q6ZQR2 320 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 LINC00346Q8IVM7 164 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 DEFB107AQ8IZN7 70 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 C3orf56Q8N813 242 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 BHLHE23Q8NDY6 225 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 DEFB108BQ8NET1 73 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 SDR9C7Q8NEX9 313 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 OR52L1Q8NGH7 329 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 SPTSSAQ969W0 71 aa10.43□□□□□ -0.74
CAPRIN1-213ENST00000533562 PLEKHA8Q96JA3 519 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms