RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 OR51V1Q9H2C8 321 aa17.44■□□□□ 0.38
CCS-208ENST00000533244 MT-ND5P03915 603 aa17.43■□□□□ 0.38
CCS-208ENST00000533244 IGFBP5P24593 272 aa17.43■□□□□ 0.38
CCS-208ENST00000533244 EPHA2P29317 976 aa17.43■□□□□ 0.38
CCS-208ENST00000533244 LIPAP38571 399 aa17.43■□□□□ 0.38
CCS-208ENST00000533244 MAGEB1P43366 347 aa17.43■□□□□ 0.38
CCS-208ENST00000533244 RIN1Q13671 783 aa17.43■□□□□ 0.38
CCS-208ENST00000533244 SLC35D3Q5M8T2 416 aa17.43■□□□□ 0.38
CCS-208ENST00000533244 SLX4IPQ5VYV7 408 aa17.43■□□□□ 0.38
CCS-208ENST00000533244 OTULINQ96BN8 352 aa17.43■□□□□ 0.38
CCS-208ENST00000533244 HAVCR1Q96D42 359 aa17.43■□□□□ 0.38
CCS-208ENST00000533244 PLEKHA8Q96JA3 519 aa17.43■□□□□ 0.38
CCS-208ENST00000533244 RAB3IPQ96QF0 476 aaPredicted RBP17.43■□□□□ 0.38
CCS-208ENST00000533244 OSBPL10Q9BXB5 764 aa17.43■□□□□ 0.38
CCS-208ENST00000533244 CYSLTR2Q9NS75 346 aa17.43■□□□□ 0.38
CCS-208ENST00000533244 TVP23BQ9NYZ1 205 aa17.43■□□□□ 0.38
CCS-208ENST00000533244 ENOPH1Q9UHY7 261 aa17.43■□□□□ 0.38
CCS-208ENST00000533244 PURGQ9UJV8 347 aaKnown RBP17.43■□□□□ 0.38
CCS-208ENST00000533244 ZFHX3Q15911 3703 aa17.43■□□□□ 0.38
CCS-208ENST00000533244 ZSCAN5BA6NJL1 495 aa17.42■□□□□ 0.38
CCS-208ENST00000533244 F5H5K5 113 aa17.42■□□□□ 0.38
CCS-208ENST00000533244 RAC2P15153 192 aa17.42■□□□□ 0.38
CCS-208ENST00000533244 ZNF81P51508 661 aa17.42■□□□□ 0.38
CCS-208ENST00000533244 EFNB1P98172 346 aa17.42■□□□□ 0.38
CCS-208ENST00000533244 SNAPC1Q16533 368 aa17.42■□□□□ 0.38
CCS-208ENST00000533244 C12orf73Q69YU5 71 aa17.42■□□□□ 0.38
CCS-208ENST00000533244 CXXC5Q7LFL8 322 aaKnown RBP17.42■□□□□ 0.38
CCS-208ENST00000533244 ERI1Q8IV48 349 aaKnown RBP17.42■□□□□ 0.38
CCS-208ENST00000533244 C10orf67Q8IYJ2 551 aa17.42■□□□□ 0.38
CCS-208ENST00000533244 BBS1Q8NFJ9 593 aa17.42■□□□□ 0.38
CCS-208ENST00000533244 OR5L1Q8NGL2 311 aa17.42■□□□□ 0.38
CCS-208ENST00000533244 CMBLQ96DG6 245 aa17.42■□□□□ 0.38
CCS-208ENST00000533244 SLAMF6Q96DU3 332 aa17.42■□□□□ 0.38
CCS-208ENST00000533244 PLSCR5A0PG75 271 aa17.41■□□□□ 0.38
CCS-208ENST00000533244 SAC3D1A6NKF1 404 aa17.41■□□□□ 0.38
CCS-208ENST00000533244 LYNX1G3V0Z9 82 aa17.41■□□□□ 0.38
CCS-208ENST00000533244 M0R135 149 aa17.41■□□□□ 0.38
CCS-208ENST00000533244 IGHV1-46P01743 117 aa17.41■□□□□ 0.38
CCS-208ENST00000533244 LYNX1P0DP58 116 aa17.41■□□□□ 0.38
CCS-208ENST00000533244 TPTEP56180 551 aa17.41■□□□□ 0.38
CCS-208ENST00000533244 CARTPTQ16568 116 aa17.41■□□□□ 0.38
CCS-208ENST00000533244 FAM209AQ5JX71 171 aa17.41■□□□□ 0.38
CCS-208ENST00000533244 DPY19L4Q7Z388 723 aa17.41■□□□□ 0.38
CCS-208ENST00000533244 NAA40Q86UY6 237 aa17.41■□□□□ 0.38
CCS-208ENST00000533244 ZNF540Q8NDQ6 660 aa17.41■□□□□ 0.38
CCS-208ENST00000533244 OR6N2Q8NGY6 317 aa17.41■□□□□ 0.38
CCS-208ENST00000533244 RDH5Q92781 318 aa17.41■□□□□ 0.38
CCS-208ENST00000533244 SPTSSAQ969W0 71 aa17.41■□□□□ 0.38
CCS-208ENST00000533244 ZMYND19Q96E35 227 aaPredicted RBP17.41■□□□□ 0.38
CCS-208ENST00000533244 ZNF799Q96GE5 643 aa17.41■□□□□ 0.38
CCS-208ENST00000533244 GABARAPL3Q9BY60 117 aa17.41■□□□□ 0.38
CCS-208ENST00000533244 PRRG3Q9BZD7 231 aa17.41■□□□□ 0.38
CCS-208ENST00000533244 BPESC1Q9GZL8 116 aa17.41■□□□□ 0.38
CCS-208ENST00000533244 ABCA1O95477 2261 aa17.41■□□□□ 0.38
CCS-208ENST00000533244 YLPM1P49750 1951 aaKnown RBP17.4■□□□□ 0.38
CCS-208ENST00000533244 ZNF878C9JN71 531 aa17.4■□□□□ 0.38
CCS-208ENST00000533244 PRKYO43930 277 aa17.4■□□□□ 0.38
CCS-208ENST00000533244 TIMM8AO60220 97 aaPredicted RBP17.4■□□□□ 0.38
CCS-208ENST00000533244 RP2O75695 350 aa17.4■□□□□ 0.38
CCS-208ENST00000533244 ACHEP22303 614 aa17.4■□□□□ 0.38
CCS-208ENST00000533244 USF1P22415 310 aaPredicted RBP17.4■□□□□ 0.38
CCS-208ENST00000533244 CCL8P80075 99 aa17.4■□□□□ 0.38
CCS-208ENST00000533244 RHOUQ7L0Q8 258 aa17.4■□□□□ 0.38
CCS-208ENST00000533244 SHFQ7M4L6 423 aa17.4■□□□□ 0.38
CCS-208ENST00000533244 RNF133Q8WVZ7 376 aa17.4■□□□□ 0.38
CCS-208ENST00000533244 YIPF5Q969M3 257 aa17.4■□□□□ 0.38
CCS-208ENST00000533244 RBM4BQ9BQ04 359 aaKnown RBP17.4■□□□□ 0.38
CCS-208ENST00000533244 ABHD6Q9BV23 337 aa17.4■□□□□ 0.38
CCS-208ENST00000533244 CHODLQ9H9P2 273 aa17.4■□□□□ 0.38
CCS-208ENST00000533244 PTTG3PQ9NZH4 202 aa17.4■□□□□ 0.38
CCS-208ENST00000533244 CD55P08174 381 aa17.39■□□□□ 0.38
CCS-208ENST00000533244 COL8A2P25067 703 aa17.39■□□□□ 0.38
CCS-208ENST00000533244 CDK5R2Q13319 367 aa17.39■□□□□ 0.38
CCS-208ENST00000533244 EIF2B1Q14232 305 aaKnown RBP17.39■□□□□ 0.38
CCS-208ENST00000533244 HLXQ14774 488 aaPredicted RBP17.39■□□□□ 0.38
CCS-208ENST00000533244 KLHL12Q53G59 568 aa17.39■□□□□ 0.38
CCS-208ENST00000533244 ZMAT1Q5H9K5 638 aa17.39■□□□□ 0.38
CCS-208ENST00000533244 DRAM2Q6UX65 266 aa17.39■□□□□ 0.38
CCS-208ENST00000533244 Q6ZR03 302 aa17.39■□□□□ 0.38
CCS-208ENST00000533244 DIRC2Q96SL1 478 aa17.39■□□□□ 0.38
CCS-208ENST00000533244 AMELYQ99218 206 aa17.39■□□□□ 0.38
CCS-208ENST00000533244 KCNJ15Q99712 375 aa17.39■□□□□ 0.38
CCS-208ENST00000533244 COPS4Q9BT78 406 aa17.39■□□□□ 0.38
CCS-208ENST00000533244 MSL2Q9HCI7 577 aa17.39■□□□□ 0.38
CCS-208ENST00000533244 S100A14Q9HCY8 104 aa17.39■□□□□ 0.38
CCS-208ENST00000533244 USE1Q9NZ43 259 aa17.39■□□□□ 0.38
CCS-208ENST00000533244 ZDHHC8Q9ULC8 765 aa17.39■□□□□ 0.38
CCS-208ENST00000533244 FN1P02751 2386 aaKnown RBP17.39■□□□□ 0.37
CCS-208ENST00000533244 IGHV4-61A0A0C4DH41 118 aa17.38■□□□□ 0.37
CCS-208ENST00000533244 CCDC182A6NF36 153 aa17.38■□□□□ 0.37
CCS-208ENST00000533244 SPRY3O43610 288 aa17.38■□□□□ 0.37
CCS-208ENST00000533244 SELENOFO60613 162 aa17.38■□□□□ 0.37
CCS-208ENST00000533244 ALPLP05186 524 aa17.38■□□□□ 0.37
CCS-208ENST00000533244 TACSTD2P09758 323 aa17.38■□□□□ 0.37
CCS-208ENST00000533244 ANOS1P23352 680 aa17.38■□□□□ 0.37
CCS-208ENST00000533244 POLR2IP36954 125 aaKnown RBP17.38■□□□□ 0.37
CCS-208ENST00000533244 CRYBB2P43320 205 aa17.38■□□□□ 0.37
CCS-208ENST00000533244 APOFQ13790 326 aa17.38■□□□□ 0.37
CCS-208ENST00000533244 TMEM249Q2WGJ8 235 aa17.38■□□□□ 0.37
CCS-208ENST00000533244 OTOSQ8NHW6 89 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms