RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 CAV2P51636 162 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 MFGE8Q08431 387 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-224ENST00000533129 TCEA2Q15560 299 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 Q7L0L9 218 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 ZSCAN1Q8NBB4 408 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 EGLN1Q9GZT9 426 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 RHOFQ9HBH0 211 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 LHX6Q9UPM6 363 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 SPTY2D1-AS1A0A0U1RR47 76 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 DCDC2BA2VCK2 349 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 METTL21EPA6NDL7 271 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 OR2T1O43869 369 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 FARS2O95363 451 aaKnown RBP13.24□□□□□ -0.29
CAPN1-224ENST00000533129 S100A9P06702 114 aaKnown RBP13.24□□□□□ -0.29
CAPN1-224ENST00000533129 THEGLP0DJG4 465 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 MUC1P15941 1255 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-224ENST00000533129 TAS2R31P59538 309 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 FNDC7Q5VTL7 733 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 KCTD18Q6PI47 426 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-224ENST00000533129 TMEM200AQ86VY9 491 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 C15orf54Q8N8G6 183 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 ZSCAN4Q8NAM6 433 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-224ENST00000533129 ADAD2Q8NCV1 583 aaKnown RBP13.24□□□□□ -0.29
CAPN1-224ENST00000533129 OR10R2Q8NGX6 335 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 GPBAR1Q8TDU6 330 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 PPP1R14AQ96A00 147 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 RRNAD1Q96FB5 475 aaKnown RBP13.24□□□□□ -0.29
CAPN1-224ENST00000533129 SMIM8Q96KF7 97 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 GUCD1Q96NT3 240 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 TPSD1Q9BZJ3 242 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 SLC22A11Q9NSA0 550 aa13.24□□□□□ -0.29
CAPN1-224ENST00000533129 LRP4O75096 1905 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 A0A0C4DFX4 3053 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 TRBV23OR9-2A0A075B6M9 112 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 HLA-DQA2P01906 255 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 PVRP15151 417 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 TBPP20226 339 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 MAOAP21397 527 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 PTAFRP25105 342 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 SNRPEP62304 92 aaKnown RBP13.23□□□□□ -0.29
CAPN1-224ENST00000533129 SKP2Q13309 424 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 FAM209BQ5JX69 171 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 OR10K2Q6IF99 312 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 JAGN1Q8N5M9 183 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 NKAIN3Q8N8D7 197 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 ACBD4Q8NC06 268 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 OR51A2Q8NGJ7 313 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 ADAMTS17Q8TE56 1095 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 TCEAL3Q969E4 200 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 KTI12Q96EK9 354 aaPredicted RBP13.23□□□□□ -0.29
CAPN1-224ENST00000533129 SEC61A2Q9H9S3 476 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 SMCO4Q9NRQ5 59 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 GDF2Q9UK05 429 aaPredicted RBP13.23□□□□□ -0.29
CAPN1-224ENST00000533129 C13orf42A0A1B0GVH6 325 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 UBE2CO00762 179 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 LYL1P12980 280 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 AKR1C4P17516 323 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 RIDAP52758 137 aaKnown RBP13.23□□□□□ -0.29
CAPN1-224ENST00000533129 RLN3Q8WXF3 142 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 FOXQ1Q9C009 403 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 RAB22AQ9UL26 194 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 B9D1Q9UPM9 204 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 FAM96BQ9Y3D0 163 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 WIF1Q9Y5W5 379 aa13.23□□□□□ -0.29
CAPN1-224ENST00000533129 WIPF3A6NGB9 483 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 C5orf52A6NGY3 159 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 TGFBR3LH3BV60 316 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 RAB27BO00194 218 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 XKRYO14609 159 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 LSSP48449 732 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 DNASE1L1P49184 302 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 CENPAP49450 140 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 CCR4P51679 360 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 LYPD6Q86Y78 171 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 GATSQ8NAP1 163 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 C8orf44Q96CB5 159 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 PCED1AQ9H1Q7 454 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 GSN-AS1Q9NRJ2 163 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 HHLA2Q9UM44 414 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 RHBDD3Q9Y3P4 386 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 OIP5O43482 229 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 SPARCP09486 303 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 SFTA3P0C7M3 94 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 GPR3P46089 330 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 SPOCK1Q08629 439 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 FZD2Q14332 565 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 CD226Q15762 336 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 IGSF11Q5DX21 431 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 FRMD1Q8N878 549 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 C16orf52Q8NHV5 167 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 OIT3Q8WWZ8 545 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 KLHDC7BQ96G42 594 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 CHRDQ9H2X0 955 aa13.22□□□□□ -0.29
CAPN1-224ENST00000533129 C1orf196B1AJZ1 125 aa13.21□□□□□ -0.29
CAPN1-224ENST00000533129 RNASEK-C17orf49H0YIS7 233 aa13.21□□□□□ -0.29
CAPN1-224ENST00000533129 H0YIZ8 118 aa13.21□□□□□ -0.29
CAPN1-224ENST00000533129 ZNF806P0C7X5 589 aa13.21□□□□□ -0.29
CAPN1-224ENST00000533129 ABCD3P28288 659 aa13.21□□□□□ -0.29
CAPN1-224ENST00000533129 HRH1P35367 487 aa13.21□□□□□ -0.29
CAPN1-224ENST00000533129 BLKP51451 505 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms