RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 ASH2LQ9UBL3 628 aa14.23□□□□□ -0.13
PKP3-209ENST00000533069 POLR1DQ9Y2S0 133 aa14.23□□□□□ -0.13
PKP3-209ENST00000533069 ABCA2Q9BZC7 2435 aa14.22□□□□□ -0.13
PKP3-209ENST00000533069 IGLV1-36A0A0B4J1U3 117 aa14.22□□□□□ -0.13
PKP3-209ENST00000533069 PLSCR5A0PG75 271 aa14.22□□□□□ -0.13
PKP3-209ENST00000533069 RIIAD1A6NNX1 92 aa14.22□□□□□ -0.13
PKP3-209ENST00000533069 ABHD16AO95870 558 aa14.22□□□□□ -0.13
PKP3-209ENST00000533069 GAAP10253 952 aa14.22□□□□□ -0.13
PKP3-209ENST00000533069 HIST1H1CP16403 213 aaKnown RBP14.22□□□□□ -0.13
PKP3-209ENST00000533069 PAICSP22234 425 aaKnown RBP14.22□□□□□ -0.13
PKP3-209ENST00000533069 POLR2IP36954 125 aaKnown RBP14.22□□□□□ -0.13
PKP3-209ENST00000533069 LIPAP38571 399 aa14.22□□□□□ -0.13
PKP3-209ENST00000533069 SNRPGP62308 76 aaKnown RBP14.22□□□□□ -0.13
PKP3-209ENST00000533069 GLO1Q04760 184 aa14.22□□□□□ -0.13
PKP3-209ENST00000533069 ZMAT1Q5H9K5 638 aa14.22□□□□□ -0.13
PKP3-209ENST00000533069 SPATA46Q5T0L3 261 aa14.22□□□□□ -0.13
PKP3-209ENST00000533069 FAM166AQ6J272 317 aa14.22□□□□□ -0.13
PKP3-209ENST00000533069 OR8D4Q8NGM9 314 aa14.22□□□□□ -0.13
PKP3-209ENST00000533069 FAM81AQ8TBF8 368 aa14.22□□□□□ -0.13
PKP3-209ENST00000533069 KLF14Q8TD94 323 aaPredicted RBP14.22□□□□□ -0.13
PKP3-209ENST00000533069 IPCEF1Q8WWN9 437 aaPredicted RBP14.22□□□□□ -0.13
PKP3-209ENST00000533069 COG8Q96MW5 612 aa14.22□□□□□ -0.13
PKP3-209ENST00000533069 NMNAT3Q96T66 252 aa14.22□□□□□ -0.13
PKP3-209ENST00000533069 OR2J1Q9GZK6 312 aa14.22□□□□□ -0.13
PKP3-209ENST00000533069 CMC2Q9NRP2 79 aa14.22□□□□□ -0.13
PKP3-209ENST00000533069 CYSLTR2Q9NS75 346 aa14.22□□□□□ -0.13
PKP3-209ENST00000533069 TBCCD1Q9NVR7 557 aa14.22□□□□□ -0.13
PKP3-209ENST00000533069 CDC42EP3Q9UKI2 254 aa14.22□□□□□ -0.13
PKP3-209ENST00000533069 OR6C6A6NF89 314 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 LYNX1G3V0Z9 82 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 J3QW42 95 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 LILRA1O75019 489 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 NCR1O76036 304 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 MPZL1O95297 269 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 NGFP01138 241 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 LYNX1P0DP58 116 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 ZNF3P17036 446 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 MAGEB1P43366 347 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 GPR6P46095 362 aaPredicted RBP14.21□□□□□ -0.13
PKP3-209ENST00000533069 CENPAP49450 140 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 ZNF81P51508 661 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 TMEM33P57088 247 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 SNAPC1Q16533 368 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 CHRFAM7AQ494W8 412 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 FAM209AQ5JX71 171 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 CLEC12AQ5QGZ9 265 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 ZBTB46Q86UZ6 589 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 PRIMA1Q86XR5 153 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 GJC3Q8NFK1 279 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 OR4K13Q8NH42 304 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 OR1F12Q8NHA8 337 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 TSSK2Q96PF2 358 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 DCLRE1CQ96SD1 692 aaKnown RBP14.21□□□□□ -0.13
PKP3-209ENST00000533069 YTHDF1Q9BYJ9 559 aaKnown RBP14.21□□□□□ -0.13
PKP3-209ENST00000533069 LPAR3Q9UBY5 353 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 KCNS2Q9ULS6 477 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 B9D1Q9UPM9 204 aa14.21□□□□□ -0.13
PKP3-209ENST00000533069 LOC100289279A0A1B0GTE1 492 aa14.2□□□□□ -0.14
PKP3-209ENST00000533069 DCTN6O00399 190 aa14.2□□□□□ -0.14
PKP3-209ENST00000533069 SURF4O15260 269 aa14.2□□□□□ -0.14
PKP3-209ENST00000533069 COL8A2P25067 703 aa14.2□□□□□ -0.14
PKP3-209ENST00000533069 EPHA2P29317 976 aa14.2□□□□□ -0.14
PKP3-209ENST00000533069 MPV17P39210 176 aa14.2□□□□□ -0.14
PKP3-209ENST00000533069 RGS6P49758 472 aa14.2□□□□□ -0.14
PKP3-209ENST00000533069 MMP15P51511 669 aa14.2□□□□□ -0.14
PKP3-209ENST00000533069 CXCR4P61073 352 aa14.2□□□□□ -0.14
PKP3-209ENST00000533069 ISL1P61371 349 aa14.2□□□□□ -0.14
PKP3-209ENST00000533069 CCL8P80075 99 aa14.2□□□□□ -0.14
PKP3-209ENST00000533069 IL5RAQ01344 420 aa14.2□□□□□ -0.14
PKP3-209ENST00000533069 OR6V1Q8N148 313 aa14.2□□□□□ -0.14
PKP3-209ENST00000533069 SLC26A10Q8NG04 563 aa14.2□□□□□ -0.14
PKP3-209ENST00000533069 RHOXF1Q8NHV9 184 aa14.2□□□□□ -0.14
PKP3-209ENST00000533069 FBLIM1Q8WUP2 373 aa14.2□□□□□ -0.14
PKP3-209ENST00000533069 RFKQ969G6 155 aa14.2□□□□□ -0.14
PKP3-209ENST00000533069 MSI2Q96DH6 328 aaKnown RBP14.2□□□□□ -0.14
PKP3-209ENST00000533069 CNBD2Q96M20 576 aa14.2□□□□□ -0.14
PKP3-209ENST00000533069 HDHD2Q9H0R4 259 aa14.2□□□□□ -0.14
PKP3-209ENST00000533069 SRA1Q9HD15 236 aaKnown RBP14.2□□□□□ -0.14
PKP3-209ENST00000533069 RPRD1BQ9NQG5 326 aaKnown RBP14.2□□□□□ -0.14
PKP3-209ENST00000533069 DECR2Q9NUI1 292 aa14.2□□□□□ -0.14
PKP3-209ENST00000533069 TVP23BQ9NYZ1 205 aa14.2□□□□□ -0.14
PKP3-209ENST00000533069 LRP5LA4QPB2 252 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 LMX1BO60663 402 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 RP2O75695 350 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 ADH4P08319 380 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 HIST1H3AP68431 136 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.19□□□□□ -0.14
PKP3-209ENST00000533069 TMED1Q13445 227 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 OCLNQ16625 522 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 CCDC92Q53HC0 331 aaPredicted RBP14.19□□□□□ -0.14
PKP3-209ENST00000533069 HIST2H3PS2Q5TEC6 136 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 ACSM5Q6NUN0 579 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 HIST2H3AQ71DI3 136 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 GID4Q8IVV7 300 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 SDR9C7Q8NEX9 313 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 OR52E2Q8NGJ4 325 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 OR4Q3Q8NH05 313 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 TMEM163Q8TC26 289 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 YIPF5Q969M3 257 aa14.19□□□□□ -0.14
PKP3-209ENST00000533069 NR1H4Q96RI1 486 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms