RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 A8MV72 311 aaPredicted RBP13.08□□□□□ -0.32
CPSF1-210ENST00000532935 TPD52L2O43399 206 aaKnown RBP13.08□□□□□ -0.32
CPSF1-210ENST00000532935 CDC14BO60729 498 aa13.08□□□□□ -0.32
CPSF1-210ENST00000532935 RP2O75695 350 aa13.08□□□□□ -0.32
CPSF1-210ENST00000532935 PSKH1P11801 424 aa13.08□□□□□ -0.32
CPSF1-210ENST00000532935 ZNF16P17020 682 aaPredicted RBP13.08□□□□□ -0.32
CPSF1-210ENST00000532935 KITLGP21583 273 aa13.08□□□□□ -0.32
CPSF1-210ENST00000532935 RPS27P42677 84 aaKnown RBP13.08□□□□□ -0.32
CPSF1-210ENST00000532935 GPR6P46095 362 aaPredicted RBP13.08□□□□□ -0.32
CPSF1-210ENST00000532935 GZMKP49863 264 aa13.08□□□□□ -0.32
CPSF1-210ENST00000532935 CHN2P52757 468 aa13.08□□□□□ -0.32
CPSF1-210ENST00000532935 CCNIQ14094 377 aa13.08□□□□□ -0.32
CPSF1-210ENST00000532935 GINS1Q14691 196 aa13.08□□□□□ -0.32
CPSF1-210ENST00000532935 TRIP10Q15642 601 aa13.08□□□□□ -0.32
CPSF1-210ENST00000532935 ZMAT1Q5H9K5 638 aa13.08□□□□□ -0.32
CPSF1-210ENST00000532935 FAM209AQ5JX71 171 aa13.08□□□□□ -0.32
CPSF1-210ENST00000532935 ZNF511Q8NB15 262 aa13.08□□□□□ -0.32
CPSF1-210ENST00000532935 OR5L1Q8NGL2 311 aa13.08□□□□□ -0.32
CPSF1-210ENST00000532935 OR6K6Q8NGW6 343 aa13.08□□□□□ -0.32
CPSF1-210ENST00000532935 PTP4A1Q93096 173 aa13.08□□□□□ -0.32
CPSF1-210ENST00000532935 APOBEC3DQ96AK3 386 aaPredicted RBP13.08□□□□□ -0.32
CPSF1-210ENST00000532935 MAP6Q96JE9 813 aa13.08□□□□□ -0.32
CPSF1-210ENST00000532935 MED20Q9H944 212 aa13.08□□□□□ -0.32
CPSF1-210ENST00000532935 WDR76Q9H967 626 aa13.08□□□□□ -0.32
CPSF1-210ENST00000532935 SAP30LQ9HAJ7 183 aa13.08□□□□□ -0.32
CPSF1-210ENST00000532935 MSL2Q9HCI7 577 aa13.08□□□□□ -0.32
CPSF1-210ENST00000532935 PTTG3PQ9NZH4 202 aa13.08□□□□□ -0.32
CPSF1-210ENST00000532935 PURGQ9UJV8 347 aaKnown RBP13.08□□□□□ -0.32
CPSF1-210ENST00000532935 IGHV1-69-2A0A0G2JMI3 117 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 FAM183AA6NL82 134 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 F5H5K5 113 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 ADH4P08319 380 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 ACSM4P0C7M7 580 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 CRYBB2P43320 205 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 ENTPD1P49961 510 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 BLVRAP53004 296 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 TMEM33P57088 247 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 SLC34A1Q06495 639 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 ATP6AP1Q15904 470 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 PCK2Q16822 640 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 LINC01590Q5TEZ4 76 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 COLCA1Q6ZS62 124 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 USP51Q70EK9 711 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 OR10S1Q8NGN2 331 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 OR5K1Q8NHB7 308 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 OTULINQ96BN8 352 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 HAVCR1Q96D42 359 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 DIRC2Q96SL1 478 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 HCAR1Q9BXC0 346 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 C1QTNF5Q9BXJ0 243 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 KIF17Q9P2E2 1029 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 ZDHHC8Q9ULC8 765 aa13.07□□□□□ -0.32
CPSF1-210ENST00000532935 ZNF593O00488 134 aaPredicted RBP13.06□□□□□ -0.32
CPSF1-210ENST00000532935 PPIHO43447 177 aaKnown RBP13.06□□□□□ -0.32
CPSF1-210ENST00000532935 CRLF1O75462 422 aa13.06□□□□□ -0.32
CPSF1-210ENST00000532935 HMGN1P05114 100 aa13.06□□□□□ -0.32
CPSF1-210ENST00000532935 SPARCP09486 303 aa13.06□□□□□ -0.32
CPSF1-210ENST00000532935 RAC2P15153 192 aa13.06□□□□□ -0.32
CPSF1-210ENST00000532935 PAICSP22234 425 aaKnown RBP13.06□□□□□ -0.32
CPSF1-210ENST00000532935 IL2RGP31785 369 aa13.06□□□□□ -0.32
CPSF1-210ENST00000532935 CDK5Q00535 292 aa13.06□□□□□ -0.32
CPSF1-210ENST00000532935 CDK5R2Q13319 367 aa13.06□□□□□ -0.32
CPSF1-210ENST00000532935 HLXQ14774 488 aaPredicted RBP13.06□□□□□ -0.32
CPSF1-210ENST00000532935 RCN1Q15293 331 aa13.06□□□□□ -0.32
CPSF1-210ENST00000532935 TEX30Q5JUR7 227 aa13.06□□□□□ -0.32
CPSF1-210ENST00000532935 FAHD1Q6P587 224 aa13.06□□□□□ -0.32
CPSF1-210ENST00000532935 FBXW12Q6X9E4 464 aa13.06□□□□□ -0.32
CPSF1-210ENST00000532935 DCXRQ7Z4W1 244 aa13.06□□□□□ -0.32
CPSF1-210ENST00000532935 DNAJC9Q8WXX5 260 aa13.06□□□□□ -0.32
CPSF1-210ENST00000532935 HPS1Q92902 700 aa13.06□□□□□ -0.32
CPSF1-210ENST00000532935 MSI2Q96DH6 328 aaKnown RBP13.06□□□□□ -0.32
CPSF1-210ENST00000532935 ELMOD3Q96FG2 381 aa13.06□□□□□ -0.32
CPSF1-210ENST00000532935 SOX7Q9BT81 388 aa13.06□□□□□ -0.32
CPSF1-210ENST00000532935 EGLN1Q9GZT9 426 aa13.06□□□□□ -0.32
CPSF1-210ENST00000532935 DDX28Q9NUL7 540 aaKnown RBP13.06□□□□□ -0.32
CPSF1-210ENST00000532935 AP4S1Q9Y587 144 aa13.06□□□□□ -0.32
CPSF1-210ENST00000532935 CUBNO60494 3623 aa13.06□□□□□ -0.32
CPSF1-210ENST00000532935 PRR23D1E9PI22 279 aaPredicted RBP13.05□□□□□ -0.32
CPSF1-210ENST00000532935 SURF4O15260 269 aa13.05□□□□□ -0.32
CPSF1-210ENST00000532935 GLCEO94923 617 aa13.05□□□□□ -0.32
CPSF1-210ENST00000532935 CD55P08174 381 aa13.05□□□□□ -0.32
CPSF1-210ENST00000532935 PRR23D2P0DMB1 279 aaPredicted RBP13.05□□□□□ -0.32
CPSF1-210ENST00000532935 ANPEPP15144 967 aa13.05□□□□□ -0.32
CPSF1-210ENST00000532935 FASP25445 335 aa13.05□□□□□ -0.32
CPSF1-210ENST00000532935 DAPP51397 102 aa13.05□□□□□ -0.32
CPSF1-210ENST00000532935 TPTEP56180 551 aa13.05□□□□□ -0.32
CPSF1-210ENST00000532935 KRTAP21-3Q3LHN1 58 aa13.05□□□□□ -0.32
CPSF1-210ENST00000532935 Q6ZR03 302 aa13.05□□□□□ -0.32
CPSF1-210ENST00000532935 NAA40Q86UY6 237 aa13.05□□□□□ -0.32
CPSF1-210ENST00000532935 HIPK1Q86Z02 1210 aa13.05□□□□□ -0.32
CPSF1-210ENST00000532935 SPTSSAQ969W0 71 aa13.05□□□□□ -0.32
CPSF1-210ENST00000532935 SLC25A19Q9HC21 320 aa13.05□□□□□ -0.32
CPSF1-210ENST00000532935 PAPOLBQ9NRJ5 636 aaKnown RBP13.05□□□□□ -0.32
CPSF1-210ENST00000532935 CACNG2Q9Y698 323 aa13.05□□□□□ -0.32
CPSF1-210ENST00000532935 LOC100289279A0A1B0GTE1 492 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 M0R135 149 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 LCATP04180 440 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 FCGR1AP12314 374 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 GSTT1P30711 240 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 CRISP1P54107 249 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms