RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 DEGS2Q6QHC5 323 aa12.42□□□□□ -0.42
COL16A1-217ENST00000532877 TMPRSS11AQ6ZMR5 421 aa12.42□□□□□ -0.42
COL16A1-217ENST00000532877 PLEKHG7Q6ZR37 379 aa12.42□□□□□ -0.42
COL16A1-217ENST00000532877 SSX8Q7RTT4 187 aa12.42□□□□□ -0.42
COL16A1-217ENST00000532877 FAM220AQ7Z4H9 259 aa12.42□□□□□ -0.42
COL16A1-217ENST00000532877 FAM169BQ8N8A8 192 aa12.42□□□□□ -0.42
COL16A1-217ENST00000532877 YIPF7Q8N8F6 280 aa12.42□□□□□ -0.42
COL16A1-217ENST00000532877 ZNF485Q8NCK3 441 aa12.42□□□□□ -0.42
COL16A1-217ENST00000532877 SPRYD4Q8WW59 207 aaPredicted RBP12.42□□□□□ -0.42
COL16A1-217ENST00000532877 SLC7A6Q92536 515 aa12.42□□□□□ -0.42
COL16A1-217ENST00000532877 ZC3HAV1LQ96H79 300 aaKnown RBP12.42□□□□□ -0.42
COL16A1-217ENST00000532877 WFIKKN1Q96NZ8 548 aa12.42□□□□□ -0.42
COL16A1-217ENST00000532877 MYCBPQ99417 103 aaPredicted RBP12.42□□□□□ -0.42
COL16A1-217ENST00000532877 ACOT13Q9NPJ3 140 aa12.42□□□□□ -0.42
COL16A1-217ENST00000532877 LSM2Q9Y333 95 aaKnown RBP12.42□□□□□ -0.42
COL16A1-217ENST00000532877 CCDC168Q8NDH2 2452 aa12.42□□□□□ -0.42
COL16A1-217ENST00000532877 TACC2O95359 2948 aa12.41□□□□□ -0.42
COL16A1-217ENST00000532877 LOC100509620A0A075B734 347 aa12.41□□□□□ -0.42
COL16A1-217ENST00000532877 MT-ND5P03915 603 aa12.41□□□□□ -0.42
COL16A1-217ENST00000532877 DBHP09172 617 aa12.41□□□□□ -0.42
COL16A1-217ENST00000532877 CECR9P0C854 216 aa12.41□□□□□ -0.42
COL16A1-217ENST00000532877 ATP6V1B1P15313 513 aa12.41□□□□□ -0.42
COL16A1-217ENST00000532877 PAX7P23759 505 aa12.41□□□□□ -0.42
COL16A1-217ENST00000532877 STOMP27105 288 aa12.41□□□□□ -0.42
COL16A1-217ENST00000532877 HSD11B1P28845 292 aa12.41□□□□□ -0.42
COL16A1-217ENST00000532877 OTX1P32242 354 aaPredicted RBP12.41□□□□□ -0.42
COL16A1-217ENST00000532877 ZNF83P51522 516 aa12.41□□□□□ -0.42
COL16A1-217ENST00000532877 WNT4P56705 351 aa12.41□□□□□ -0.42
COL16A1-217ENST00000532877 EMX1Q04741 257 aaPredicted RBP12.41□□□□□ -0.42
COL16A1-217ENST00000532877 RSPO1Q2MKA7 263 aaPredicted RBP12.41□□□□□ -0.42
COL16A1-217ENST00000532877 WFDC8Q8IUA0 241 aa12.41□□□□□ -0.42
COL16A1-217ENST00000532877 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.41□□□□□ -0.42
COL16A1-217ENST00000532877 SLC30A7Q8NEW0 376 aa12.41□□□□□ -0.42
COL16A1-217ENST00000532877 SPTSSAQ969W0 71 aa12.41□□□□□ -0.42
COL16A1-217ENST00000532877 PELI1Q96FA3 418 aa12.41□□□□□ -0.42
COL16A1-217ENST00000532877 POM121L2Q96KW2 1035 aa12.41□□□□□ -0.42
COL16A1-217ENST00000532877 OR5M11Q96RB7 305 aa12.41□□□□□ -0.42
COL16A1-217ENST00000532877 KCNJ15Q99712 375 aa12.41□□□□□ -0.42
COL16A1-217ENST00000532877 PKDREJQ9NTG1 2253 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 IGHV1-18A0A0C4DH31 117 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 C5orf49A4QMS7 147 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 TRIM64CA6NLI5 447 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 C19orf84I3L1E1 186 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 M0R135 149 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 RPP14O95059 124 aaKnown RBP12.4□□□□□ -0.42
COL16A1-217ENST00000532877 LCKP06239 509 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 TACSTD2P09758 323 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 CCL2P13500 99 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 APLNRP35414 380 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 CX3CR1P49238 355 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 PRKXP51817 358 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 PSMA6P60900 246 aaKnown RBP12.4□□□□□ -0.42
COL16A1-217ENST00000532877 GALK2Q01415 458 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 HGFACQ04756 655 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 MED22Q15528 200 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 C3orf36Q3SXR2 165 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 LIPNQ5VXI9 398 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 XAF1Q6GPH4 301 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 KCTD8Q6ZWB6 473 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 ZNF367Q7RTV3 350 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 KCTD20Q7Z5Y7 419 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 EGFL6Q8IUX8 553 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 LINC01560Q8TB33 94 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 GATAD2BQ8WXI9 593 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 RNF166Q96A37 237 aaPredicted RBP12.4□□□□□ -0.42
COL16A1-217ENST00000532877 ZNF799Q96GE5 643 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 DOK1Q99704 481 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 NIPAL2Q9H841 368 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 NDRG3Q9UGV2 375 aa12.4□□□□□ -0.42
COL16A1-217ENST00000532877 NAV3Q8IVL0 2385 aa12.4□□□□□ -0.43
COL16A1-217ENST00000532877 TUBAL3A6NHL2 446 aa12.39□□□□□ -0.43
COL16A1-217ENST00000532877 F5H5K5 113 aa12.39□□□□□ -0.43
COL16A1-217ENST00000532877 M0R1B8 84 aa12.39□□□□□ -0.43
COL16A1-217ENST00000532877 SRSF10O75494 262 aaKnown RBP12.39□□□□□ -0.43
COL16A1-217ENST00000532877 LALBAP00709 142 aa12.39□□□□□ -0.43
COL16A1-217ENST00000532877 ACSM4P0C7M7 580 aa12.39□□□□□ -0.43
COL16A1-217ENST00000532877 IGFBP2P18065 325 aa12.39□□□□□ -0.43
COL16A1-217ENST00000532877 DCTDP32321 178 aa12.39□□□□□ -0.43
COL16A1-217ENST00000532877 PSMB10P40306 273 aa12.39□□□□□ -0.43
COL16A1-217ENST00000532877 GDI2P50395 445 aaKnown RBP12.39□□□□□ -0.43
COL16A1-217ENST00000532877 MFGE8Q08431 387 aaPredicted RBP12.39□□□□□ -0.43
COL16A1-217ENST00000532877 SPHARQ15513 63 aa12.39□□□□□ -0.43
COL16A1-217ENST00000532877 NEDD8Q15843 81 aa12.39□□□□□ -0.43
COL16A1-217ENST00000532877 TBC1D28Q2M2D7 210 aa12.39□□□□□ -0.43
COL16A1-217ENST00000532877 ZNF829Q3KNS6 432 aaPredicted RBP12.39□□□□□ -0.43
COL16A1-217ENST00000532877 UBE2UQ5VVX9 321 aa12.39□□□□□ -0.43
COL16A1-217ENST00000532877 KLBQ86Z14 1044 aa12.39□□□□□ -0.43
COL16A1-217ENST00000532877 PAQR4Q8N4S7 273 aaPredicted RBP12.39□□□□□ -0.43
COL16A1-217ENST00000532877 ZNF283Q8N7M2 679 aa12.39□□□□□ -0.43
COL16A1-217ENST00000532877 FCGR1BQ92637 280 aa12.39□□□□□ -0.43
COL16A1-217ENST00000532877 RORBQ92753 470 aa12.39□□□□□ -0.43
COL16A1-217ENST00000532877 MRPS26Q9BYN8 205 aaKnown RBP12.39□□□□□ -0.43
COL16A1-217ENST00000532877 TRIM36Q9NQ86 728 aa12.39□□□□□ -0.43
COL16A1-217ENST00000532877 BABAM2Q9NXR7 383 aa12.39□□□□□ -0.43
COL16A1-217ENST00000532877 GRIP1Q9Y3R0 1128 aa12.39□□□□□ -0.43
COL16A1-217ENST00000532877 KLF2Q9Y5W3 355 aaPredicted RBP12.39□□□□□ -0.43
COL16A1-217ENST00000532877 R4GMQ9 66 aa12.39□□□□□ -0.43
COL16A1-217ENST00000532877 CADP27708 2225 aa12.39□□□□□ -0.43
COL16A1-217ENST00000532877 E9PI62 339 aa12.38□□□□□ -0.43
COL16A1-217ENST00000532877 PNPP00491 289 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms