RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 LGI3Q8N145 548 aa3.42□□□□□ -1.86
CASP4-208ENST00000530309 JAGN1Q8N5M9 183 aa3.42□□□□□ -1.86
CASP4-208ENST00000530309 OR11H7Q8NGC8 314 aa3.42□□□□□ -1.86
CASP4-208ENST00000530309 OR6Q1Q8NGQ2 317 aa3.42□□□□□ -1.86
CASP4-208ENST00000530309 ZNF461Q8TAF7 563 aa3.42□□□□□ -1.86
CASP4-208ENST00000530309 RGP1Q92546 391 aaPredicted RBP3.42□□□□□ -1.86
CASP4-208ENST00000530309 NEURL3Q96EH8 262 aa3.42□□□□□ -1.86
CASP4-208ENST00000530309 MTG1Q9BT17 334 aaPredicted RBP3.42□□□□□ -1.86
CASP4-208ENST00000530309 RSPO3Q9BXY4 272 aaPredicted RBP3.42□□□□□ -1.86
CASP4-208ENST00000530309 TSSC4Q9Y5U2 329 aaPredicted RBP3.42□□□□□ -1.86
CASP4-208ENST00000530309 VPS8Q8N3P4 1428 aa3.42□□□□□ -1.86
CASP4-208ENST00000530309 GAKO14976 1311 aa3.42□□□□□ -1.86
CASP4-208ENST00000530309 PALLDQ8WX93 1383 aa3.41□□□□□ -1.86
CASP4-208ENST00000530309 TEX46H3BTG2 121 aa3.41□□□□□ -1.86
CASP4-208ENST00000530309 CLTAP09496 248 aa3.41□□□□□ -1.86
CASP4-208ENST00000530309 CTRB1P17538 263 aa3.41□□□□□ -1.86
CASP4-208ENST00000530309 CSNK2A2P19784 350 aaPredicted RBP3.41□□□□□ -1.86
CASP4-208ENST00000530309 GSTM3P21266 225 aa3.41□□□□□ -1.86
CASP4-208ENST00000530309 RPS23P62266 143 aaKnown RBP3.41□□□□□ -1.86
CASP4-208ENST00000530309 ILKQ13418 452 aa3.41□□□□□ -1.86
CASP4-208ENST00000530309 ART3Q13508 389 aa3.41□□□□□ -1.86
CASP4-208ENST00000530309 C1orf185Q5T7R7 199 aa3.41□□□□□ -1.86
CASP4-208ENST00000530309 SHISA6Q6ZSJ9 500 aa3.41□□□□□ -1.86
CASP4-208ENST00000530309 OR4K5Q8NGD3 323 aa3.41□□□□□ -1.86
CASP4-208ENST00000530309 OR52K2Q8NGK3 314 aa3.41□□□□□ -1.86
CASP4-208ENST00000530309 OR51E1Q8TCB6 317 aa3.41□□□□□ -1.86
CASP4-208ENST00000530309 NRBF2Q96F24 287 aa3.41□□□□□ -1.86
CASP4-208ENST00000530309 HSD17B10Q99714 261 aaKnown RBP3.41□□□□□ -1.86
CASP4-208ENST00000530309 TEKT3Q9BXF9 490 aa3.41□□□□□ -1.86
CASP4-208ENST00000530309 SLC7A5P2Q9GIP4 190 aa3.41□□□□□ -1.86
CASP4-208ENST00000530309 OR52D1Q9H346 318 aa3.41□□□□□ -1.86
CASP4-208ENST00000530309 MRM3Q9HC36 420 aaKnown RBP3.41□□□□□ -1.86
CASP4-208ENST00000530309 WFDC1Q9HC57 220 aa3.41□□□□□ -1.86
CASP4-208ENST00000530309 ZNF835Q9Y2P0 537 aa3.41□□□□□ -1.86
CASP4-208ENST00000530309 TNS2Q63HR2 1409 aa3.41□□□□□ -1.86
CASP4-208ENST00000530309 UBN2Q6ZU65 1347 aa3.41□□□□□ -1.86
CASP4-208ENST00000530309 CEP164Q9UPV0 1460 aa3.41□□□□□ -1.86
CASP4-208ENST00000530309 CASQ2O14958 399 aaPredicted RBP3.4□□□□□ -1.87
CASP4-208ENST00000530309 NVLO15381 856 aaKnown RBP3.4□□□□□ -1.87
CASP4-208ENST00000530309 SOCS1O15524 211 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 REM1O75628 298 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 HLA-DQA1P01909 254 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 FGF4P08620 206 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 ZNF286BP0CG31 522 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 OR8G3PP0DMU2 310 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 C1GALT1C1LP0DN25 315 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 ANXA8P13928 327 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 IL32P24001 234 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 TNFSF9P41273 254 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 ANXA8L1Q5VT79 327 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 SAXO2Q658L1 398 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 STUMQ69YW2 141 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 ZNF880Q6PDB4 577 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 SLC16A13Q7RTY0 426 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 WDFY1Q8IWB7 410 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 ZNF561Q8N587 486 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 ZNF709Q8N972 641 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 SNX31Q8N9S9 440 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 ESR2Q92731 530 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 OR10C1Q96KK4 312 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 LINC00477Q96M19 166 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 FOXC2Q99958 501 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 ELOVL6Q9H5J4 265 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 MRPS30Q9NP92 439 aaKnown RBP3.4□□□□□ -1.87
CASP4-208ENST00000530309 ACP6Q9NPH0 428 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 MED4Q9NPJ6 270 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 CLN6Q9NWW5 311 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 CCDC88BA6NC98 1476 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 PLA2R1Q13018 1463 aa3.4□□□□□ -1.87
CASP4-208ENST00000530309 KDM5BQ9UGL1 1544 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 SMARCA2P51531 1590 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 SOGA1O94964 1423 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 TRAV19A0A0A6YYK7 116 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 COLCA2A8K830 154 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 H7C1H1 209 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 M0R3G1 203 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 CTAG2O75638 210 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 HLA-HP01893 362 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 OPRK1P41145 380 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 RBM34P42696 430 aaKnown RBP3.39□□□□□ -1.87
CASP4-208ENST00000530309 CXCL12P48061 93 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 SLC11A1P49279 550 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 ZNF121P58317 390 aaPredicted RBP3.39□□□□□ -1.87
CASP4-208ENST00000530309 ZNF266Q14584 549 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 ITIH4Q14624 930 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 COX19Q49B96 90 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 OR56A4Q8NGH8 313 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 OR6N1Q8NGY5 312 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 L3HYPDHQ96EM0 354 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 ZNF488Q96MN9 340 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 RNF145Q96MT1 663 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 ZNF317Q96PQ6 595 aaPredicted RBP3.39□□□□□ -1.87
CASP4-208ENST00000530309 RNF157Q96PX1 679 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 RRAGDQ9NQL2 400 aaPredicted RBP3.39□□□□□ -1.87
CASP4-208ENST00000530309 GGA2Q9UJY4 613 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 TBC1D24Q9ULP9 559 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 RCL1Q9Y2P8 373 aaKnown RBP3.39□□□□□ -1.87
CASP4-208ENST00000530309 SAR1BQ9Y6B6 198 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 GOLGA3Q08378 1498 aa3.39□□□□□ -1.87
CASP4-208ENST00000530309 FHOD3Q2V2M9 1422 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms