RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 OPN1SWP03999 348 aa9.5□□□□□ -0.89
AMBRA1-207ENST00000529553 UBE2E1P51965 193 aa9.5□□□□□ -0.89
AMBRA1-207ENST00000529553 C6orf10Q5SRN2 563 aa9.5□□□□□ -0.89
AMBRA1-207ENST00000529553 C19orf18Q8NEA5 215 aa9.5□□□□□ -0.89
AMBRA1-207ENST00000529553 LRRC8CQ8TDW0 803 aa9.5□□□□□ -0.89
AMBRA1-207ENST00000529553 ADAMTS16Q8TE57 1224 aa9.5□□□□□ -0.89
AMBRA1-207ENST00000529553 WIPF2Q8TF74 440 aaPredicted RBP9.5□□□□□ -0.89
AMBRA1-207ENST00000529553 UBLCP1Q8WVY7 318 aaPredicted RBP9.5□□□□□ -0.89
AMBRA1-207ENST00000529553 SORT1Q99523 831 aa9.5□□□□□ -0.89
AMBRA1-207ENST00000529553 ECSITQ9BQ95 431 aa9.5□□□□□ -0.89
AMBRA1-207ENST00000529553 CPPED1Q9BRF8 314 aaPredicted RBP9.5□□□□□ -0.89
AMBRA1-207ENST00000529553 C20orf27Q9GZN8 174 aa9.5□□□□□ -0.89
AMBRA1-207ENST00000529553 NPFFR1Q9GZQ6 430 aa9.5□□□□□ -0.89
AMBRA1-207ENST00000529553 PAIP1Q9H074 479 aaKnown RBP9.5□□□□□ -0.89
AMBRA1-207ENST00000529553 MEGF9Q9H1U4 602 aa9.5□□□□□ -0.89
AMBRA1-207ENST00000529553 TMEM38AQ9H6F2 299 aa9.5□□□□□ -0.89
AMBRA1-207ENST00000529553 MEPEQ9NQ76 525 aaPredicted RBP9.5□□□□□ -0.89
AMBRA1-207ENST00000529553 POLE4Q9NR33 117 aa9.5□□□□□ -0.89
AMBRA1-207ENST00000529553 ZIM2Q9NZV7 527 aa9.5□□□□□ -0.89
AMBRA1-207ENST00000529553 ATPIF1Q9UII2 106 aa9.5□□□□□ -0.89
AMBRA1-207ENST00000529553 SLC7A7Q9UM01 511 aa9.5□□□□□ -0.89
AMBRA1-207ENST00000529553 GMEB1Q9Y692 573 aa9.5□□□□□ -0.89
AMBRA1-207ENST00000529553 TLDC2A0PJX2 215 aa9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 MEIOCA2RUB1 952 aa9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 CPSF4LA6NMK7 179 aaKnown RBP9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 H3BUX3 64 aa9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 KPNA4O00629 521 aaPredicted RBP9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 SDHDO14521 159 aa9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 POLR3GO15318 223 aaPredicted RBP9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 BIRC5O15392 142 aa9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 OR7A10O76100 309 aa9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 ZNF26P17031 533 aaPredicted RBP9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 HOXB9P17482 250 aaPredicted RBP9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 BGNP21810 368 aa9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 PPIBP23284 216 aaKnown RBP9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 SAA4P35542 130 aa9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 SLC1A6P48664 564 aa9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 SLC35A2P78381 396 aa9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 SFRP4Q6FHJ7 346 aaPredicted RBP9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 C1orf94Q6P1W5 598 aa9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 Q8N2B8 174 aa9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 GOLGA6L1Q8N7Z2 621 aa9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 EIF1ADQ8N9N8 165 aaKnown RBP9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 OR6T1Q8NGN1 323 aa9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 SLC7A13Q8TCU3 470 aa9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 APOBEC3DQ96AK3 386 aaPredicted RBP9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 C16orf45Q96MC5 204 aaPredicted RBP9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 SSX3Q99909 188 aa9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 CITED2Q99967 270 aaPredicted RBP9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 C20orf141Q9NUB4 165 aa9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 SERTAD4Q9NUC0 356 aa9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 PTTG3PQ9NZH4 202 aa9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 NOP16Q9Y3C1 178 aaKnown RBP9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 TENM2Q9NT68 2774 aa9.49□□□□□ -0.89
AMBRA1-207ENST00000529553 A0A1W2PPL8 197 aa9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 WDR91A4D1P6 747 aa9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 OR6C6A6NF89 314 aa9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 OOEPA6NGQ2 149 aa9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 TYROBPO43914 113 aa9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 FCN3O75636 299 aa9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 ZFPL1O95159 310 aa9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 PTBP3O95758 552 aaKnown RBP9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 HLA-DPB1P04440 258 aa9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 SCG5P05408 212 aa9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 RBM34P42696 430 aaKnown RBP9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 POLR2JP52435 117 aaKnown RBP9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 RPL27P61353 136 aaKnown RBP9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 SCARB2Q14108 478 aa9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 LAPTM4AQ15012 233 aa9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 OR8B8Q15620 311 aa9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 ZBTB37Q5TC79 503 aa9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 C10orf111Q8N326 155 aa9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 MOSPD2Q8NHP6 518 aa9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 TNFRSF14Q92956 283 aa9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 PRSS27Q9BQR3 290 aa9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 HCAR1Q9BXC0 346 aa9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 GPR61Q9BZJ8 451 aa9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 SLC22A4Q9H015 551 aa9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 WDR55Q9H6Y2 383 aaPredicted RBP9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 SDR39U1Q9NRG7 319 aaPredicted RBP9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 ONECUT1Q9UBC0 465 aa9.48□□□□□ -0.89
AMBRA1-207ENST00000529553 HTR3EA5X5Y0 456 aa9.47□□□□□ -0.89
AMBRA1-207ENST00000529553 A6NIZ1 184 aa9.47□□□□□ -0.89
AMBRA1-207ENST00000529553 TRPC5OSA6NMA1 111 aa9.47□□□□□ -0.89
AMBRA1-207ENST00000529553 M0R3H8 397 aa9.47□□□□□ -0.89
AMBRA1-207ENST00000529553 RAP1BP61224 184 aa9.47□□□□□ -0.89
AMBRA1-207ENST00000529553 RAP1AP62834 184 aa9.47□□□□□ -0.89
AMBRA1-207ENST00000529553 AQP6Q13520 282 aa9.47□□□□□ -0.89
AMBRA1-207ENST00000529553 MPPED2Q15777 294 aa9.47□□□□□ -0.89
AMBRA1-207ENST00000529553 DUSP7Q16829 419 aa9.47□□□□□ -0.89
AMBRA1-207ENST00000529553 LRIF1Q5T3J3 769 aa9.47□□□□□ -0.89
AMBRA1-207ENST00000529553 CASC10Q5T4H9 136 aa9.47□□□□□ -0.89
AMBRA1-207ENST00000529553 NCR3LG1Q68D85 454 aa9.47□□□□□ -0.89
AMBRA1-207ENST00000529553 Q8N7P7 452 aa9.47□□□□□ -0.89
AMBRA1-207ENST00000529553 SMYD1Q8NB12 490 aa9.47□□□□□ -0.89
AMBRA1-207ENST00000529553 BHLHE23Q8NDY6 225 aa9.47□□□□□ -0.89
AMBRA1-207ENST00000529553 OR1F12Q8NHA8 337 aa9.47□□□□□ -0.89
AMBRA1-207ENST00000529553 SGTBQ96EQ0 304 aa9.47□□□□□ -0.89
AMBRA1-207ENST00000529553 WNT10AQ9GZT5 417 aa9.47□□□□□ -0.89
AMBRA1-207ENST00000529553 SIRT7Q9NRC8 400 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms