RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 KLRC3Q07444 240 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 PUDPQ08623 228 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 ST3GAL3Q11203 375 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 ZNF154Q13106 437 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 KRR1Q13601 381 aaKnown RBP2.65□□□□□ -1.99
CD44-229ENST00000528672 RAB31Q13636 194 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 GRK1Q15835 563 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 CCL14Q16627 93 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 FAM120AOSQ5T036 256 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 PVRIGQ6DKI7 326 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 KRTAP5-4Q6L8H1 288 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 ULK3Q6PHR2 472 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 DNM1P34Q6PK57 102 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 UQCC3Q6UW78 93 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 H2BFWTQ7Z2G1 175 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 TMEM135Q86UB9 458 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 SERPINA9Q86WD7 417 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 ANGPTL5Q86XS5 388 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 KRTAP7-1Q8IUC3 87 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 PGAM4Q8N0Y7 254 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 CSNK1A1LQ8N752 337 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 CLDN22Q8N7P3 220 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 C8orf31Q8N9H6 132 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 CDRT4Q8N9R6 151 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 Q8NBF4 154 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 HSD17B11Q8NBQ5 300 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 B3GNT7Q8NFL0 401 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 PXT1Q8NFP0 134 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 OR2AP1Q8NGE2 309 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 OR52H1Q8NGJ2 320 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 OR9A4Q8NGU2 314 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 PIGXQ8TBF5 258 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 NPRL2Q8WTW4 380 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 APH1BQ8WW43 257 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 PTH2Q96A98 100 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 ANKRD9Q96BM1 317 aaPredicted RBP2.65□□□□□ -1.99
CD44-229ENST00000528672 L3HYPDHQ96EM0 354 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 TIMD4Q96H15 378 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 C14orf144Q96I85 54 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 RNF170Q96K19 258 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 POM121L2Q96KW2 1035 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 DUX3Q96PT4 197 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 OR2V2Q96R30 315 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 OR5M11Q96RB7 305 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 TSNAXQ99598 290 aaKnown RBP2.65□□□□□ -1.99
CD44-229ENST00000528672 ATF6BQ99941 703 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 CHCHD5Q9BSY4 110 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 NAT10Q9H0A0 1025 aaKnown RBP2.65□□□□□ -1.99
CD44-229ENST00000528672 PORCNQ9H237 461 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 GLIPR2Q9H4G4 154 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 AMBNQ9NP70 447 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 PRSS16Q9NQE7 514 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 CUTCQ9NTM9 273 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 LYARQ9NX58 379 aaKnown RBP2.65□□□□□ -1.99
CD44-229ENST00000528672 EHFQ9NZC4 300 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 NUDT4Q9NZJ9 180 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 IFNKQ9P0W0 207 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 SLC2A6Q9UGQ3 507 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 DKKL1Q9UK85 242 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 DNAJC12Q9UKB3 198 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 POLR3HQ9Y535 204 aaPredicted RBP2.65□□□□□ -1.99
CD44-229ENST00000528672 PPIAL4AQ9Y536 164 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 ARAP1Q96P48 1450 aa2.65□□□□□ -1.99
CD44-229ENST00000528672 ANKRD30BQ9BXX2 1392 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 A0A1W2PPE3 182 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 SMCO3A2RU48 225 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 RPL37AP8A6NKH3 93 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 FOXI3A8MTJ6 420 aaPredicted RBP2.64□□□□□ -1.99
CD44-229ENST00000528672 A8MXK9 166 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 C9J4A7 227 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 CLDN34H7C241 214 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 M0R036 132 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 AZIN1O14977 448 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 ZBTB5O15062 677 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 MAGEB4O15481 346 aaPredicted RBP2.64□□□□□ -1.99
CD44-229ENST00000528672 TGOLN2O43493 480 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 PRKAB2O43741 272 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 ATP5LO75964 103 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 AQP8O94778 261 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 ETHE1O95571 254 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 AP2A1O95782 977 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 HOXD4P09016 255 aaPredicted RBP2.64□□□□□ -1.99
CD44-229ENST00000528672 H2AFZP0C0S5 128 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 ATP1B2P14415 290 aaPredicted RBP2.64□□□□□ -1.99
CD44-229ENST00000528672 DPEP1P16444 411 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 CSNK2A2P19784 350 aaPredicted RBP2.64□□□□□ -1.99
CD44-229ENST00000528672 GZMHP20718 246 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 BGNP21810 368 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 LMO2P25791 158 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 CD1CP29017 333 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 RPL35P42766 123 aaKnown RBP2.64□□□□□ -1.99
CD44-229ENST00000528672 MAGEA12P43365 314 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 UQCRFS1P47985 274 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 VEGFCP49767 419 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 PPOXP50336 477 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 IDH3GP51553 393 aaPredicted RBP2.64□□□□□ -1.99
CD44-229ENST00000528672 VSX2P58304 361 aaPredicted RBP2.64□□□□□ -1.99
CD44-229ENST00000528672 PLP1P60201 277 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 RANP62826 216 aaKnown RBP2.64□□□□□ -1.99
CD44-229ENST00000528672 FAM3AP98173 230 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms