RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 HMGA2P52926 109 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 RFX4Q33E94 735 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 TMEM255AQ5JRV8 349 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 OR2T5Q6IEZ7 315 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 THSD4Q6ZMP0 1018 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 ZBTB49Q6ZSB9 765 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 AMIGO2Q86SJ2 522 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 ZDHHC13Q8IUH4 622 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 OR2T29Q8NH02 315 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 OR1F12Q8NHA8 337 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 CMBLQ96DG6 245 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 NUAK2Q9H093 628 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 HDHD2Q9H0R4 259 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 NTN4Q9HB63 628 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 MSL2Q9HCI7 577 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 STARD10Q9Y365 291 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 NPTNQ9Y639 398 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 CACNG2Q9Y698 323 aa12.02□□□□□ -0.49
CAPN1-212ENST00000527887 SOCS2O14508 198 aa12.01□□□□□ -0.49
CAPN1-212ENST00000527887 FOXH1O75593 365 aa12.01□□□□□ -0.49
CAPN1-212ENST00000527887 FPR3P25089 353 aa12.01□□□□□ -0.49
CAPN1-212ENST00000527887 SLC6A6P31641 620 aa12.01□□□□□ -0.49
CAPN1-212ENST00000527887 CDKN2AP42771 156 aaKnown RBP12.01□□□□□ -0.49
CAPN1-212ENST00000527887 FXYD6P3P58550 94 aa12.01□□□□□ -0.49
CAPN1-212ENST00000527887 SEC23BQ15437 767 aa12.01□□□□□ -0.49
CAPN1-212ENST00000527887 TMEM155Q4W5P6 130 aa12.01□□□□□ -0.49
CAPN1-212ENST00000527887 CCDC92Q53HC0 331 aaPredicted RBP12.01□□□□□ -0.49
CAPN1-212ENST00000527887 DCAF12L2Q5VW00 463 aa12.01□□□□□ -0.49
CAPN1-212ENST00000527887 LPCAT4Q643R3 524 aa12.01□□□□□ -0.49
CAPN1-212ENST00000527887 FBXW12Q6X9E4 464 aa12.01□□□□□ -0.49
CAPN1-212ENST00000527887 SPICQ8N5J4 248 aa12.01□□□□□ -0.49
CAPN1-212ENST00000527887 ZNF283Q8N7M2 679 aa12.01□□□□□ -0.49
CAPN1-212ENST00000527887 OR52J3Q8NH60 311 aa12.01□□□□□ -0.49
CAPN1-212ENST00000527887 OR5K1Q8NHB7 308 aa12.01□□□□□ -0.49
CAPN1-212ENST00000527887 NANPQ8TBE9 248 aa12.01□□□□□ -0.49
CAPN1-212ENST00000527887 ST7LQ8TDW4 575 aa12.01□□□□□ -0.49
CAPN1-212ENST00000527887 JMJD8Q96S16 334 aa12.01□□□□□ -0.49
CAPN1-212ENST00000527887 COQ7Q99807 217 aa12.01□□□□□ -0.49
CAPN1-212ENST00000527887 RERGLQ9H628 205 aa12.01□□□□□ -0.49
CAPN1-212ENST00000527887 TMEM106BQ9NUM4 274 aa12.01□□□□□ -0.49
CAPN1-212ENST00000527887 POLR1DQ9Y2S0 133 aa12.01□□□□□ -0.49
CAPN1-212ENST00000527887 NBEAL1Q6ZS30 2694 aa12.01□□□□□ -0.49
CAPN1-212ENST00000527887 ISPDA4D126 451 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 GNGT2O14610 69 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 RENP00797 406 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 HIST1H3AP68431 136 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 SRSF2Q01130 221 aaKnown RBP12□□□□□ -0.49
CAPN1-212ENST00000527887 ECH1Q13011 328 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 SLC36A3Q495N2 470 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 HIST2H3PS2Q5TEC6 136 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 IZUMO2Q6UXV1 221 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 PTCHD4Q6ZW05 846 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 HIST2H3AQ71DI3 136 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 C1QL2Q7Z5L3 287 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 JAZF1Q86VZ6 243 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 LINC00471Q8N535 108 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 OR2Z1Q8NG97 314 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 APOBEC3DQ96AK3 386 aaPredicted RBP12□□□□□ -0.49
CAPN1-212ENST00000527887 ERMAPQ96PL5 475 aaPredicted RBP12□□□□□ -0.49
CAPN1-212ENST00000527887 GPA33Q99795 319 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 CIB1Q99828 191 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 TMPRSS13Q9BYE2 586 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 SEMA6AQ9H2E6 1030 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 Q9H521 79 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 USE1Q9NZ43 259 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 IL20RAQ9UHF4 553 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 TMCC3Q9ULS5 477 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 RAB26Q9ULW5 256 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 OAZ3Q9UMX2 235 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 PCDHB10Q9UN67 800 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 B9D1Q9UPM9 204 aa12□□□□□ -0.49
CAPN1-212ENST00000527887 G3V2T6 193 aa11.99□□□□□ -0.49
CAPN1-212ENST00000527887 RER1O15258 196 aa11.99□□□□□ -0.49
CAPN1-212ENST00000527887 OR10H3O60404 316 aa11.99□□□□□ -0.49
CAPN1-212ENST00000527887 DIRAS1O95057 198 aa11.99□□□□□ -0.49
CAPN1-212ENST00000527887 IGHV2-70P01814 119 aa11.99□□□□□ -0.49
CAPN1-212ENST00000527887 SELEP16581 610 aa11.99□□□□□ -0.49
CAPN1-212ENST00000527887 EPHA1P21709 976 aa11.99□□□□□ -0.49
CAPN1-212ENST00000527887 NOS3P29474 1203 aa11.99□□□□□ -0.49
CAPN1-212ENST00000527887 SPIBQ01892 262 aa11.99□□□□□ -0.49
CAPN1-212ENST00000527887 COX10Q12887 443 aa11.99□□□□□ -0.49
CAPN1-212ENST00000527887 C1orf94Q6P1W5 598 aa11.99□□□□□ -0.49
CAPN1-212ENST00000527887 C1orf229Q6ZS94 237 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-212ENST00000527887 LRRC28Q86X40 367 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-212ENST00000527887 KLHL36Q8N4N3 616 aa11.99□□□□□ -0.49
CAPN1-212ENST00000527887 SEMA6DQ8NFY4 1073 aa11.99□□□□□ -0.49
CAPN1-212ENST00000527887 OR13G1Q8NGZ3 307 aa11.99□□□□□ -0.49
CAPN1-212ENST00000527887 FANK1Q8TC84 345 aa11.99□□□□□ -0.49
CAPN1-212ENST00000527887 GNPDA2Q8TDQ7 276 aa11.99□□□□□ -0.49
CAPN1-212ENST00000527887 OR52D1Q9H346 318 aa11.99□□□□□ -0.49
CAPN1-212ENST00000527887 REEP1Q9H902 201 aa11.99□□□□□ -0.49
CAPN1-212ENST00000527887 PPP1R3CQ9UQK1 317 aa11.99□□□□□ -0.49
CAPN1-212ENST00000527887 LRCH1Q9Y2L9 728 aa11.99□□□□□ -0.49
CAPN1-212ENST00000527887 POLR3KQ9Y2Y1 108 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-212ENST00000527887 V9GYQ6 96 aa11.99□□□□□ -0.49
CAPN1-212ENST00000527887 IGLV1-36A0A0B4J1U3 117 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 ARRDC5A6NEK1 342 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 VENTXO95231 258 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 FSTL3O95633 263 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 PPP1R3DO95685 299 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms