RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 MED18Q9BUE0 208 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 ADGRL4Q9HBW9 690 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 PLXNA3P51805 1871 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 FUOMA2VDF0 154 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 IFITM5A6NNB3 132 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 ACTL6AO96019 429 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 GRPP07492 148 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 LSM11P83369 360 aaKnown RBP eCLIP13.49□□□□□ -0.252e-20■■■■■ 46.3
USP47-207ENST00000527733 DPPA2Q7Z7J5 298 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 SF3B5Q9BWJ5 86 aaKnown RBP13.49□□□□□ -0.25
USP47-207ENST00000527733 OR51J1Q9H342 316 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 ZMAT3Q9HA38 289 aaKnown RBP13.49□□□□□ -0.25
USP47-207ENST00000527733 MGAT4AQ9UM21 535 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 E9PI62 339 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 SC5DO75845 299 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 TIAF1O95411 115 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 NRASP01111 189 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 MAGEA5P43359 124 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 FHL5Q5TD97 284 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 RAB39BQ96DA2 213 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 ZNF471Q9BX82 626 aaPredicted RBP13.49□□□□□ -0.25
USP47-207ENST00000527733 BCO1Q9HAY6 547 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 ZNF71Q9NQZ8 489 aaPredicted RBP13.49□□□□□ -0.25
USP47-207ENST00000527733 RBFOX1Q9NWB1 397 aaKnown RBP13.49□□□□□ -0.25
USP47-207ENST00000527733 TRAPPC2LQ9UL33 140 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 M0R233 179 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 CELA2AP08217 269 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 PCK2Q16822 640 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 STEAP3Q658P3 488 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 STAC2Q6ZMT1 411 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 CFAP77Q6ZQR2 320 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 NRARPQ7Z6K4 114 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 FAM83FQ8NEG4 500 aaPredicted RBP13.49□□□□□ -0.25
USP47-207ENST00000527733 OR2M7Q8NG81 312 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 OR51A2Q8NGJ7 313 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 APH1BQ8WW43 257 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 MBD2Q9UBB5 411 aa13.49□□□□□ -0.25
USP47-207ENST00000527733 PSMB1P20618 241 aaKnown RBP13.48□□□□□ -0.25
USP47-207ENST00000527733 TGM4P49221 684 aa13.48□□□□□ -0.25
USP47-207ENST00000527733 ZNF133P52736 654 aaPredicted RBP13.48□□□□□ -0.25
USP47-207ENST00000527733 OR8G1Q15617 311 aa13.48□□□□□ -0.25
USP47-207ENST00000527733 LYPD4Q6UWN0 246 aa13.48□□□□□ -0.25
USP47-207ENST00000527733 ZFAND1Q8TCF1 268 aa13.48□□□□□ -0.25
USP47-207ENST00000527733 ZFP57Q9NU63 452 aa13.48□□□□□ -0.25
USP47-207ENST00000527733 TGFBR1P36897 503 aa13.48□□□□□ -0.25
USP47-207ENST00000527733 IL13RA1P78552 427 aa13.48□□□□□ -0.25
USP47-207ENST00000527733 RAB35Q15286 201 aa13.48□□□□□ -0.25
USP47-207ENST00000527733 XAF1Q6GPH4 301 aa13.48□□□□□ -0.25
USP47-207ENST00000527733 OR2T35Q8NGX2 323 aa13.48□□□□□ -0.25
USP47-207ENST00000527733 OR56B4Q8NH76 319 aa13.48□□□□□ -0.25
USP47-207ENST00000527733 SPIN2AQ99865 258 aa13.48□□□□□ -0.25
USP47-207ENST00000527733 SPIN2BQ9BPZ2 258 aa13.48□□□□□ -0.25
USP47-207ENST00000527733 HAO2Q9NYQ3 351 aa13.48□□□□□ -0.25
USP47-207ENST00000527733 NDRG3Q9UGV2 375 aa13.48□□□□□ -0.25
USP47-207ENST00000527733 MEIOCA2RUB1 952 aa13.48□□□□□ -0.25
USP47-207ENST00000527733 SP1P08047 785 aa13.48□□□□□ -0.25
USP47-207ENST00000527733 CDK2P24941 298 aa13.48□□□□□ -0.25
USP47-207ENST00000527733 CD96P40200 585 aa13.48□□□□□ -0.25
USP47-207ENST00000527733 RAD52P43351 418 aa13.48□□□□□ -0.25
USP47-207ENST00000527733 WFDC8Q8IUA0 241 aa13.48□□□□□ -0.25
USP47-207ENST00000527733 BANF2Q9H503 90 aa13.48□□□□□ -0.25
USP47-207ENST00000527733 FAM157BP0CG42 384 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 ZNF718Q3SXZ3 478 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 FAM198BQ6UWH4 519 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 DRAM2Q6UX65 266 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 TRILQ7L0X0 811 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 RNF128Q8TEB7 428 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 ADIPOR1Q96A54 375 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 APOBEC3DQ96AK3 386 aaPredicted RBP13.47□□□□□ -0.25
USP47-207ENST00000527733 EGLN1Q9GZT9 426 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 DECR2Q9NUI1 292 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 RER1O15258 196 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 DNPH1O43598 174 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 GLSO94925 669 aaPredicted RBP13.47□□□□□ -0.25
USP47-207ENST00000527733 RBMS2Q15434 407 aaKnown RBP13.47□□□□□ -0.25
USP47-207ENST00000527733 GSG1Q2KHT4 349 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 ZNF658BQ4V348 819 aaPredicted RBP13.47□□□□□ -0.25
USP47-207ENST00000527733 ZNF695Q8IW36 515 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 FNDC9Q8TBE3 224 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 SPACA1Q9HBV2 294 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 PRMT8Q9NR22 394 aaPredicted RBP13.47□□□□□ -0.25
USP47-207ENST00000527733 POLDIP2Q9Y2S7 368 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 TANC1Q9C0D5 1861 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 F5H0A9 414 aaPredicted RBP13.47□□□□□ -0.25
USP47-207ENST00000527733 HSPB6O14558 160 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 ELK1P19419 428 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 MGAT2Q10469 447 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 FAM27D1Q5T7N8 215 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 OR51F2Q8NH61 342 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 SPACA5Q96QH8 159 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 BORCS7-ASMTA0A0B4J1R7 106 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 TRAV1-2A0A0B4J238 106 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 GPANK1O95872 356 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 BGLAPP02818 100 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 STEAP1BQ6NZ63 245 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 NPEPL1Q8NDH3 523 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 ASB10Q8WXI3 467 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 GPA33Q99795 319 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 RGCCQ9H4X1 137 aa13.47□□□□□ -0.25
USP47-207ENST00000527733 LRRC30A6NM36 301 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms