RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 RBP7Q96R05 134 aa11.88□□□□□ -0.51
CPSF1-201ENST00000526271 CHIAQ9BZP6 476 aa11.88□□□□□ -0.51
CPSF1-201ENST00000526271 POLR2J2Q9GZM3 115 aaKnown RBP11.88□□□□□ -0.51
CPSF1-201ENST00000526271 POLR2J3Q9H1A7 115 aaKnown RBP11.88□□□□□ -0.51
CPSF1-201ENST00000526271 MUC13Q9H3R2 512 aa11.88□□□□□ -0.51
CPSF1-201ENST00000526271 MARCH7Q9H992 704 aa11.88□□□□□ -0.51
CPSF1-201ENST00000526271 ACTR3BQ9P1U1 418 aa11.88□□□□□ -0.51
CPSF1-201ENST00000526271 CTSZQ9UBR2 303 aa11.88□□□□□ -0.51
CPSF1-201ENST00000526271 DNAH3Q8TD57 4116 aa11.88□□□□□ -0.51
CPSF1-201ENST00000526271 A0A087WUU8 490 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 A0A0G2JK05 382 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 SRRM5B3KS81 715 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 F5H5P2 479 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 DCTN6O00399 190 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 SGCEO43556 437 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 IFNA14P01570 189 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 SFTPBP07988 381 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 MMP9P14780 707 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 NCK1P16333 377 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 TNFRSF1AP19438 455 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 ARHGDIAP52565 204 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 PCBD1P61457 104 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 SELENOWP63302 87 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 MAB21L1Q13394 359 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 ZMAT1Q5H9K5 638 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 C1orf94Q6P1W5 598 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 FBXW12Q6X9E4 464 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 CBLL1Q75N03 491 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 VTCN1Q7Z7D3 282 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 MOGAT3Q86VF5 341 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 NPEPL1Q8NDH3 523 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 RASSF5Q8WWW0 418 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 UTP4Q969X6 686 aaKnown RBP11.87□□□□□ -0.51
CPSF1-201ENST00000526271 MCUR1Q96AQ8 359 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 RASD2Q96D21 266 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 ASB9Q96DX5 294 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 TNFRSF19Q9NS68 423 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 DCAF13Q9NV06 445 aaKnown RBP11.87□□□□□ -0.51
CPSF1-201ENST00000526271 PTTG3PQ9NZH4 202 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 OR5V1Q9UGF6 321 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 MAGEL2Q9UJ55 1249 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 BAG5Q9UL15 447 aa11.87□□□□□ -0.51
CPSF1-201ENST00000526271 TEX13CA0A0J9YWL9 993 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 C12orf71A8MTZ7 269 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 ARPC2O15144 300 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 RER1O15258 196 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 GMNNO75496 209 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 HLA-DPB1P04440 258 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 RAC2P15153 192 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 RPS2P15880 293 aaKnown RBP11.86□□□□□ -0.51
CPSF1-201ENST00000526271 GSTM3P21266 225 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 GPR4P46093 362 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 RAD23AP54725 363 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 FGF12P61328 243 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 HIST1H3AP68431 136 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 MEP1BQ16820 701 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 KRTAP27-1Q3LI81 207 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 CLEC12AQ5QGZ9 265 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 HIST2H3PS2Q5TEC6 136 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 WDR25Q64LD2 544 aaPredicted RBP11.86□□□□□ -0.51
CPSF1-201ENST00000526271 ASPHD2Q6ICH7 369 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 SLC27A4Q6P1M0 643 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 Q6YL49 198 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 PTCHD4Q6ZW05 846 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 HIST2H3AQ71DI3 136 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 OFCC1Q8IZS5 231 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 OR8G5Q8NG78 346 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 PTP4A1Q93096 173 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 TBX15Q96SF7 602 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 SLC30A2Q9BRI3 323 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 WDR76Q9H967 626 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 ASH2LQ9UBL3 628 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 IL20RAQ9UHF4 553 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 POMPQ9Y244 141 aa11.86□□□□□ -0.51
CPSF1-201ENST00000526271 COA3Q9Y2R0 106 aaPredicted RBP11.86□□□□□ -0.51
CPSF1-201ENST00000526271 PRSS37A4D1T9 235 aa11.85□□□□□ -0.51
CPSF1-201ENST00000526271 C5orf63A6NC05 138 aa11.85□□□□□ -0.51
CPSF1-201ENST00000526271 A6NIZ1 184 aa11.85□□□□□ -0.51
CPSF1-201ENST00000526271 TNFRSF13BO14836 293 aaPredicted RBP11.85□□□□□ -0.51
CPSF1-201ENST00000526271 PTP4A3O75365 173 aa11.85□□□□□ -0.51
CPSF1-201ENST00000526271 SERPINA1P01009 418 aa11.85□□□□□ -0.51
CPSF1-201ENST00000526271 MELTFP08582 738 aa11.85□□□□□ -0.51
CPSF1-201ENST00000526271 PSMB10P40306 273 aa11.85□□□□□ -0.51
CPSF1-201ENST00000526271 SLC9A3P48764 834 aa11.85□□□□□ -0.51
CPSF1-201ENST00000526271 RAG2P55895 527 aa11.85□□□□□ -0.51
CPSF1-201ENST00000526271 RAP1BP61224 184 aa11.85□□□□□ -0.51
CPSF1-201ENST00000526271 RAP1AP62834 184 aa11.85□□□□□ -0.51
CPSF1-201ENST00000526271 SCRN3Q0VDG4 424 aa11.85□□□□□ -0.51
CPSF1-201ENST00000526271 ST3GAL3Q11203 375 aa11.85□□□□□ -0.51
CPSF1-201ENST00000526271 ZNF181Q2M3W8 571 aa11.85□□□□□ -0.51
CPSF1-201ENST00000526271 LRRC23Q53EV4 343 aaPredicted RBP11.85□□□□□ -0.51
CPSF1-201ENST00000526271 FAM205BPQ63HN1 556 aa11.85□□□□□ -0.51
CPSF1-201ENST00000526271 LCN8Q6JVE9 175 aa11.85□□□□□ -0.51
CPSF1-201ENST00000526271 FIP1L1Q6UN15 594 aaKnown RBP11.85□□□□□ -0.51
CPSF1-201ENST00000526271 LRRN1Q6UXK5 716 aa11.85□□□□□ -0.51
CPSF1-201ENST00000526271 UNQ6126/PRO20091Q6UXV3 157 aa11.85□□□□□ -0.51
CPSF1-201ENST00000526271 ZER1Q7Z7L7 766 aa11.85□□□□□ -0.51
CPSF1-201ENST00000526271 DHFR2Q86XF0 187 aa11.85□□□□□ -0.51
CPSF1-201ENST00000526271 MUC20Q8N307 709 aaPredicted RBP11.85□□□□□ -0.51
CPSF1-201ENST00000526271 ATG16L2Q8NAA4 619 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms