RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 DHRS1Q96LJ7 313 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 SAMD8Q96LT4 415 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 FNDC11Q9BVV2 318 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 OSBPL10Q9BXB5 764 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 RASSF4Q9H2L5 321 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 TXNIPQ9H3M7 391 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 WDR76Q9H967 626 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 TMEM165Q9HC07 324 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 NDUFAF4Q9P032 175 aa5.51□□□□□ -1.53
CD44-221ENST00000526000 WNK1Q9H4A3 2382 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 PPIAL4EA0A075B759 164 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 TRAV27A0A087WT01 109 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 PPIAL4CA0A0B4J2A2 164 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 ARRDC5A6NEK1 342 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 PPIAL4DF5H284 164 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 F5H5P2 479 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 PRB2P02812 416 aaPredicted RBP5.5□□□□□ -1.53
CD44-221ENST00000526000 HLA-DPB1P04440 258 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 H1F0P07305 194 aaKnown RBP5.5□□□□□ -1.53
CD44-221ENST00000526000 CD55P08174 381 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 CST2P09228 141 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 PPIAL4FP0DN26 164 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 TNFRSF1AP19438 455 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 GSTM3P21266 225 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 LIPAP38571 399 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 MDH2P40926 338 aaKnown RBP5.5□□□□□ -1.53
CD44-221ENST00000526000 PMELP40967 661 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 HMGA2P52926 109 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 FGF12P61328 243 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 RPL27P61353 136 aaKnown RBP5.5□□□□□ -1.53
CD44-221ENST00000526000 RELBQ01201 579 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 PRB3Q04118 309 aaPredicted RBP5.5□□□□□ -1.53
CD44-221ENST00000526000 POU4F2Q12837 409 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 TMEM155Q4W5P6 130 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 BRICD5Q6PL45 260 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 ARL9Q6T311 187 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 BTNL3Q6UXE8 466 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 UNQ6126/PRO20091Q6UXV3 157 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 MOGAT3Q86VF5 341 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 KLBQ86Z14 1044 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 ZNF283Q8N7M2 679 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 BHLHE23Q8NDY6 225 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 CANT1Q8WVQ1 401 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 RAB40AQ8WXH6 277 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 DNAJC9Q8WXX5 260 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 HAVCR1Q96D42 359 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 NRBF2Q96F24 287 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 SIGLEC11Q96RL6 698 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 NUDT16L1Q9BRJ7 211 aaKnown RBP5.5□□□□□ -1.53
CD44-221ENST00000526000 TMEM246Q9BRR3 403 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 PCGF1Q9BSM1 259 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 ZNF426Q9BUY5 554 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 CHID1Q9BWS9 393 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 CDADC1Q9BWV3 514 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 SSBP3Q9BWW4 388 aaPredicted RBP5.5□□□□□ -1.53
CD44-221ENST00000526000 CHIAQ9BZP6 476 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 SLITRK2Q9H156 845 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 NMNAT1Q9HAN9 279 aaPredicted RBP5.5□□□□□ -1.53
CD44-221ENST00000526000 BEX1Q9HBH7 125 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 GCM1Q9NP62 436 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 UFSP2Q9NUQ7 469 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 DNAJB9Q9UBS3 223 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 TMCC3Q9ULS5 477 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 A4GNTQ9UNA3 340 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 AURKCQ9UQB9 309 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 TMEM5Q9Y2B1 443 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 MED31Q9Y3C7 131 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 AP4S1Q9Y587 144 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 MEGF8Q7Z7M0 2845 aa5.5□□□□□ -1.53
CD44-221ENST00000526000 IGHV2-70DA0A0C4DH43 119 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 KIR2DS1A0A191URI9 304 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 ERICH4A6NGS2 130 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 C12orf71A8MTZ7 269 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 F5H0A9 414 aaPredicted RBP5.49□□□□□ -1.53
CD44-221ENST00000526000 J3KTA2 159 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 SURF4O15260 269 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 SGCEO43556 437 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 DOK2O60496 412 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 GADD45GO95257 159 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 CST1P01037 141 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 SFTPBP07988 381 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 ADH4P08319 380 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 MSR1P21757 451 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 FASP25445 335 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 RRM2P31350 389 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 RPL4P36578 427 aaKnown RBP5.49□□□□□ -1.53
CD44-221ENST00000526000 SLC9A3P48764 834 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 MMP16P51512 607 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 ZNF133P52736 654 aaPredicted RBP5.49□□□□□ -1.53
CD44-221ENST00000526000 RAG2P55895 527 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 PCBD1P61457 104 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 PAX2Q02962 417 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 KPNB1Q14974 876 aaKnown RBP5.49□□□□□ -1.53
CD44-221ENST00000526000 TUSC1Q2TAM9 212 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 NRN1LQ496H8 165 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 OLFML2AQ68BL7 652 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 SFRP4Q6FHJ7 346 aaPredicted RBP5.49□□□□□ -1.53
CD44-221ENST00000526000 OR2T5Q6IEZ7 315 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 TBPL2Q6SJ96 375 aa5.49□□□□□ -1.53
CD44-221ENST00000526000 LRRN1Q6UXK5 716 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms