RNA–Protein interactions for RNA: ENST00000525997.1

PUM1-216, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-216	ENST00000525997	TMEM212	A6NML5	194 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997		F5H5K5	113 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997		J3QLW9	94 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997		J3QRE1	110 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	SYNGR3	O43761	229 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	GPRIN2	O60269	458 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	APOL3	O95236	402 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	ATE1	O95260	518 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	GPANK1	O95872	356 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	LCAT	P04180	440 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	ANXA2	P07355	339 aa	Known RBP	4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	CECR9	P0C854	216 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	UBC	P0CG48	685 aa	Known RBP	4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	BMP4	P12644	408 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	ATP6V1B1	P15313	513 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	ZNF14	P17017	642 aa	Predicted RBP	4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	ZNF19	P17023	458 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	CD53	P19397	219 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	CCNO	P22674	350 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	PSMA1	P25786	263 aa	Known RBP	4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	CD40	P25942	277 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	OTX1	P32242	354 aa	Predicted RBP	4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	OPRL1	P41146	370 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	RANBP1	P43487	201 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	TGM4	P49221	684 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	CX3CR1	P49238	355 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	ZNF83	P51522	516 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	CCR9	P51686	369 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	TUBA1B	P68363	451 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	NAAA	Q02083	359 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	ACSM1	Q08AH1	577 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	GPR50	Q13585	617 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	RAB39A	Q14964	217 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	SPHAR	Q15513	63 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	MED22	Q15528	200 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	TRAM1	Q15629	374 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	TSC22D1	Q15714	1073 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	TIMM50	Q3ZCQ8	353 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	CCDC92	Q53HC0	331 aa	Predicted RBP	4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	ZMAT1	Q5H9K5	638 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	BCL2L15	Q5TBC7	163 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	ALKBH2	Q6NS38	261 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	ZNF774	Q6NX45	483 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	RPL22L1	Q6P5R6	122 aa	Known RBP	4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	CORO6	Q6QEF8	472 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	LYPD4	Q6UWN0	246 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	CLEC18B	Q6UXF7	455 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	LRRN1	Q6UXK5	716 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	B3GLCT	Q6Y288	498 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	MEX3B	Q6ZN04	569 aa	Known RBP	4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	CFAP77	Q6ZQR2	320 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	TUBA1A	Q71U36	451 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	LSR	Q86X29	649 aa	Predicted RBP	4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	COMMD2	Q86X83	199 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	DMRTC2	Q8IXT2	367 aa	Predicted RBP	4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	CLEC18C	Q8NCF0	446 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	NUP37	Q8NFH4	326 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	TSPAN14	Q8NG11	270 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	AKR7L	Q8NHP1	331 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	ZNRF4	Q8WWF5	429 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	AKAP1	Q92667	903 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	UFD1	Q92890	307 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	FBXO17	Q96EF6	278 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	PGAM5	Q96HS1	289 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	MAP6	Q96JE9	813 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	POM121L2	Q96KW2	1035 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	C4orf45	Q96LM5	186 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	WFIKKN1	Q96NZ8	548 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	MRPS26	Q9BYN8	205 aa	Known RBP	4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	WNT5B	Q9H1J7	359 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	FAIM	Q9NVQ4	179 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	BABAM2	Q9NXR7	383 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	SLCO1C1	Q9NYB5	712 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	UBAP1	Q9NZ09	502 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	ZNF224	Q9NZL3	707 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	CGGBP1	Q9UFW8	167 aa	Predicted RBP	4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	SCOC	Q9UIL1	159 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	GTF2A1L	Q9UNN4	478 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	NOP16	Q9Y3C1	178 aa	Known RBP	4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	GRIP1	Q9Y3R0	1128 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	RNF115	Q9Y4L5	304 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	LRP12	Q9Y561	859 aa		4.56	□□□□□ -1.68
PUM1-216	ENST00000525997	FREM1	Q5H8C1	2179 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	ALPK2	Q86TB3	2170 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	IGHV2OR16-5	A0A0B4J2B6	119 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	IGHV1-18	A0A0C4DH31	117 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997		A0A0U1RQV5	110 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997		A0A1B0GVI7	797 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.55	□□□□□ -1.68
PUM1-216	ENST00000525997		A0A1W2PR80	420 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	TRIM64	A6NGJ6	449 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	DHRS7C	A6NNS2	312 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	TBX1	O43435	398 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	CLPTM1	O96005	669 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	SERPINA3	P01011	423 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	MT-ND2	P03891	347 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	SCG5	P05408	212 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	CD1A	P06126	327 aa		4.55	□□□□□ -1.68
PUM1-216	ENST00000525997	CD2	P06729	351 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms