RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 SCD5Q86SK9 330 aa1.85□□□□□ -2.11
COPB1-203ENST00000525214 MICU2Q8IYU8 434 aa1.85□□□□□ -2.11
COPB1-203ENST00000525214 GTPBP8Q8N3Z3 284 aaPredicted RBP1.85□□□□□ -2.11
COPB1-203ENST00000525214 ELMO1Q92556 727 aa1.85□□□□□ -2.11
COPB1-203ENST00000525214 STMN2Q93045 179 aa1.85□□□□□ -2.11
COPB1-203ENST00000525214 ISG20Q96AZ6 181 aaKnown RBP1.85□□□□□ -2.11
COPB1-203ENST00000525214 PLEKHA8Q96JA3 519 aa1.85□□□□□ -2.11
COPB1-203ENST00000525214 GSDMAQ96QA5 445 aa1.85□□□□□ -2.11
COPB1-203ENST00000525214 FMO2Q99518 471 aa1.85□□□□□ -2.11
COPB1-203ENST00000525214 BCL7BQ9BQE9 202 aa1.85□□□□□ -2.11
COPB1-203ENST00000525214 SHANK2-AS3Q9BTD1 123 aa1.85□□□□□ -2.11
COPB1-203ENST00000525214 C20orf24Q9BUV8 137 aa1.85□□□□□ -2.11
COPB1-203ENST00000525214 C1orf198Q9H425 327 aa1.85□□□□□ -2.11
COPB1-203ENST00000525214 ANKRD19PQ9H560 264 aa1.85□□□□□ -2.11
COPB1-203ENST00000525214 TDRD3Q9H7E2 651 aaKnown RBP1.85□□□□□ -2.11
COPB1-203ENST00000525214 GEMIN7Q9H840 131 aaKnown RBP1.85□□□□□ -2.11
COPB1-203ENST00000525214 SLC38A10Q9HBR0 1119 aa1.85□□□□□ -2.11
COPB1-203ENST00000525214 CHRAC1Q9NRG0 131 aa1.85□□□□□ -2.11
COPB1-203ENST00000525214 FAM49BQ9NUQ9 324 aa1.85□□□□□ -2.11
COPB1-203ENST00000525214 MRPL22Q9NWU5 206 aaKnown RBP1.85□□□□□ -2.11
COPB1-203ENST00000525214 GCNT4Q9P109 453 aa1.85□□□□□ -2.11
COPB1-203ENST00000525214 PEF1Q9UBV8 284 aaKnown RBP1.85□□□□□ -2.11
COPB1-203ENST00000525214 TRAV25A0A0B4J276 109 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 TRDMT1O14717 391 aaKnown RBP1.84□□□□□ -2.11
COPB1-203ENST00000525214 LSM1O15116 133 aaKnown RBP1.84□□□□□ -2.11
COPB1-203ENST00000525214 POLR1CO15160 346 aaPredicted RBP1.84□□□□□ -2.11
COPB1-203ENST00000525214 DNAJB6O75190 326 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 DEDDO75618 318 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 H6PDO95479 791 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 TPM1P09493 284 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 OR8G3PP0DMU2 310 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 ZNF24P17028 368 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 EIF2S2P20042 333 aaKnown RBP1.84□□□□□ -2.11
COPB1-203ENST00000525214 RRM2P31350 389 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 ETV1P50549 477 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 ACLYP53396 1101 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 EIF3EP60228 445 aaKnown RBP1.84□□□□□ -2.11
COPB1-203ENST00000525214 YWHAGP61981 247 aaKnown RBP eCLIP1.84□□□□□ -2.11
COPB1-203ENST00000525214 DOC2AQ14183 400 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 GK3PQ14409 553 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 CHRNA6Q15825 494 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 KLHL40Q2TBA0 621 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 VPS26BQ4G0F5 336 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 TTC19Q6DKK2 380 aaPredicted RBP1.84□□□□□ -2.11
COPB1-203ENST00000525214 GUSBP11Q6P575 273 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 LRRC74BQ6ZQY2 392 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 LINC00336Q6ZUF6 198 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 KATNAL2Q8IYT4 538 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 ZNF321PQ8N8H1 164 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 OR2L3Q8NG85 312 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 GPR151Q8TDV0 419 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 SEH1LQ96EE3 360 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 BPIFA3Q9BQP9 254 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 NUP50Q9UKX7 468 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 STARD10Q9Y365 291 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 CBY1Q9Y3M2 126 aa1.84□□□□□ -2.11
COPB1-203ENST00000525214 CSDC2Q9Y534 153 aaKnown RBP1.84□□□□□ -2.11
COPB1-203ENST00000525214 TNIKQ9UKE5 1360 aa1.84□□□□□ -2.12
COPB1-203ENST00000525214 A0A1W2PPV9 198 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 TMEM120BA0PK00 339 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 ERICH4A6NGS2 130 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 SUPT3HB4E1H0 165 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 GOLGA8TH3BQL2 631 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 M0QX08 132 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 DYNC1I1O14576 645 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 OR2F2O95006 317 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 TMEM50AO95807 157 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 SERPIND1P05546 499 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 CCNB1P14635 433 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 RAB3BP20337 219 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 KITLGP21583 273 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 MSR1P21757 451 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 BMI1P35226 326 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 TNFSF9P41273 254 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 CLDN8P56748 225 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 CARD18P57730 90 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 KCNJ2P63252 427 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 CDH17Q12864 832 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 DNAJC3Q13217 504 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 ZNF235Q14590 738 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 NKAIN1Q4KMZ8 207 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 RNASE13Q5GAN3 156 aaKnown RBP1.83□□□□□ -2.12
COPB1-203ENST00000525214 THEM4Q5T1C6 240 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 PIP5KL1Q5T9C9 394 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 AADACL4Q5VUY2 407 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 PLCXD3Q63HM9 321 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 SLC8B1Q6J4K2 584 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 OFCC1Q8IZS5 231 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 GABRG1Q8N1C3 465 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 OR1L6Q8NGR2 347 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 OR8K3Q8NH51 312 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 KLF14Q8TD94 323 aaPredicted RBP1.83□□□□□ -2.12
COPB1-203ENST00000525214 GLYATL2Q8WU03 294 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 PTX4Q96A99 478 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 C19orf60Q96EN9 201 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 PRRC1Q96M27 445 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 BLZF1Q9H2G9 400 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 XKR8Q9H6D3 395 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 LZTFL1Q9NQ48 299 aa1.83□□□□□ -2.12
COPB1-203ENST00000525214 C20orf96Q9NUD7 363 aaPredicted RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms