RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 A0A1B0GW55 424 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 NVLO15381 856 aaKnown RBP2.34□□□□□ -2.03
PCM1-219ENST00000523540 RAD51CO43502 376 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 OR2F2O95006 317 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 CDRT1O95170 752 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 ZNF688P0C7X2 276 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 DUX4L2P0CJ85 424 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 DUX4L3P0CJ86 424 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 DUX4L5P0CJ88 424 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 DUX4L6P0CJ89 424 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 DUX4L7P0CJ90 424 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 TAS2R31P59538 309 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 RPS23P62266 143 aaKnown RBP2.34□□□□□ -2.03
PCM1-219ENST00000523540 CCNA1P78396 465 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 CDK5Q00535 292 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 IDI1Q13907 227 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 PIGHQ14442 188 aaPredicted RBP2.34□□□□□ -2.03
PCM1-219ENST00000523540 TRAM2Q15035 370 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 PSMD5Q16401 504 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 ALKBH6Q3KRA9 238 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 HSP90AB3PQ58FF7 597 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 C1orf185Q5T7R7 199 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 CARD17Q5XLA6 110 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 AP1ARQ63HQ0 302 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 MBOAT2Q6ZWT7 520 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 MRPL55Q7Z7F7 128 aaKnown RBP2.34□□□□□ -2.03
PCM1-219ENST00000523540 CBLN2Q8IUK8 224 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 OR11H7Q8NGC8 314 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 LYPD6BQ8NI32 183 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 PHF10Q8WUB8 498 aaKnown RBP2.34□□□□□ -2.03
PCM1-219ENST00000523540 SULT4A1Q9BR01 284 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 ZNF717Q9BY31 904 aaPredicted RBP2.34□□□□□ -2.03
PCM1-219ENST00000523540 SAMD10Q9BYL1 202 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 C1orf198Q9H425 327 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 NMRK1Q9NWW6 199 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 DUX4Q9UBX2 424 aa2.34□□□□□ -2.03
PCM1-219ENST00000523540 TRAV6A0A075B6T7 132 aa2.33□□□□□ -2.04
PCM1-219ENST00000523540 TRAV19A0A0A6YYK7 116 aa2.33□□□□□ -2.04
PCM1-219ENST00000523540 KRBOX1C9JBD0 128 aa2.33□□□□□ -2.04
PCM1-219ENST00000523540 LSM1O15116 133 aaKnown RBP2.33□□□□□ -2.04
PCM1-219ENST00000523540 CHST10O43529 356 aa2.33□□□□□ -2.04
PCM1-219ENST00000523540 SLC22A5O76082 557 aa2.33□□□□□ -2.04
PCM1-219ENST00000523540 RNASE2P10153 161 aaKnown RBP2.33□□□□□ -2.04
PCM1-219ENST00000523540 LOXP28300 417 aaPredicted RBP2.33□□□□□ -2.04
PCM1-219ENST00000523540 OR1E1P30953 314 aa2.33□□□□□ -2.04
PCM1-219ENST00000523540 LIPEQ05469 1076 aa2.33□□□□□ -2.04
PCM1-219ENST00000523540 TGM3Q08188 693 aa2.33□□□□□ -2.04
PCM1-219ENST00000523540 IFT88Q13099 833 aa2.33□□□□□ -2.04
PCM1-219ENST00000523540 HSDL1Q3SXM5 330 aa2.33□□□□□ -2.04
PCM1-219ENST00000523540 ADNP2Q6IQ32 1131 aa2.33□□□□□ -2.04
PCM1-219ENST00000523540 NKAIN4Q8IVV8 208 aa2.33□□□□□ -2.04
PCM1-219ENST00000523540 TMEM256Q8N2U0 113 aa2.33□□□□□ -2.04
PCM1-219ENST00000523540 OR5K2Q8NHB8 316 aa2.33□□□□□ -2.04
PCM1-219ENST00000523540 APH1BQ8WW43 257 aa2.33□□□□□ -2.04
PCM1-219ENST00000523540 RBBP8Q99708 897 aa2.33□□□□□ -2.04
PCM1-219ENST00000523540 TBL1YQ9BQ87 522 aa2.33□□□□□ -2.04
PCM1-219ENST00000523540 GGTLC1Q9BX51 225 aa2.33□□□□□ -2.04
PCM1-219ENST00000523540 RETNQ9HD89 108 aa2.33□□□□□ -2.04
PCM1-219ENST00000523540 EXOSC4Q9NPD3 245 aaKnown RBP2.33□□□□□ -2.04
PCM1-219ENST00000523540 FBXO6Q9NRD1 293 aaPredicted RBP2.33□□□□□ -2.04
PCM1-219ENST00000523540 AP3B1O00203 1094 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 IGLV3-25P01717 112 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 HLA-DQB1P01920 261 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 KRT14P02533 472 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 MYL2P10916 166 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 IL1RNP18510 177 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 BCKDHBP21953 392 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 ME2P23368 584 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 RBM34P42696 430 aaKnown RBP2.32□□□□□ -2.04
PCM1-219ENST00000523540 RPL23P62829 140 aaKnown RBP2.32□□□□□ -2.04
PCM1-219ENST00000523540 LRRC74AQ0VAA2 488 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 TTC23LQ6PF05 361 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 SCD5Q86SK9 330 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 FAM71AQ8IYT1 594 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 MIR7-3HGQ8N6C7 128 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 OR9A2Q8NGT5 310 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 OR13G1Q8NGZ3 307 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 RNF145Q96MT1 663 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 NAP1L5Q96NT1 182 aaPredicted RBP2.32□□□□□ -2.04
PCM1-219ENST00000523540 ZNF317Q96PQ6 595 aaPredicted RBP2.32□□□□□ -2.04
PCM1-219ENST00000523540 TMEM185BQ9H7F4 350 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 NEK6Q9HC98 313 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 ZNF160Q9HCG1 818 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 MED4Q9NPJ6 270 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 ENOPH1Q9UHY7 261 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 NINLQ9Y2I6 1382 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 FHOD3Q2V2M9 1422 aa2.32□□□□□ -2.04
PCM1-219ENST00000523540 IGHV3-72A0A0B4J1Y9 119 aa2.31□□□□□ -2.04
PCM1-219ENST00000523540 IGHV7-4-1A0A0J9YVY3 117 aa2.31□□□□□ -2.04
PCM1-219ENST00000523540 CENPVL3A0A0U1RRI6 287 aa2.31□□□□□ -2.04
PCM1-219ENST00000523540 A6NDN8 102 aa2.31□□□□□ -2.04
PCM1-219ENST00000523540 CCDC169A6NNP5 214 aa2.31□□□□□ -2.04
PCM1-219ENST00000523540 H7C1H1 209 aa2.31□□□□□ -2.04
PCM1-219ENST00000523540 LGALS9O00182 355 aa2.31□□□□□ -2.04
PCM1-219ENST00000523540 PLPP1O14494 284 aa2.31□□□□□ -2.04
PCM1-219ENST00000523540 CDC40O60508 579 aaKnown RBP eCLIP2.31□□□□□ -2.04
PCM1-219ENST00000523540 HUS1O60921 280 aa2.31□□□□□ -2.04
PCM1-219ENST00000523540 ERLIN1O75477 346 aa2.31□□□□□ -2.04
PCM1-219ENST00000523540 GLSO94925 669 aaPredicted RBP2.31□□□□□ -2.04
PCM1-219ENST00000523540 MRPL19P49406 292 aaKnown RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms