RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 METTL8Q9H825 291 aaKnown RBP7.53□□□□□ -1.2
CSMD1-213ENST00000523488 MED31Q9Y3C7 131 aa7.53□□□□□ -1.2
CSMD1-213ENST00000523488 ARID1BQ8NFD5 2236 aaPredicted RBP7.53□□□□□ -1.2
CSMD1-213ENST00000523488 A0A0B4J2E0 115 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 A0A1B0GX12 115 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 ZNF840PA6NDX5 716 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 TMEM202A6NGA9 273 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 TMEM210A6NLX4 147 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 C9J4A7 227 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 ZFPL1O95159 310 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 TACSTD2P09758 323 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 C8orf89P0DMQ9 161 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 OR13C7P0DN81 318 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 UCP1P25874 307 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 SLC35A1P78382 337 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 VAX1Q5SQQ9 334 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 SPNS3Q6ZMD2 512 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 LILRA3Q8N6C8 439 aaPredicted RBP7.52□□□□□ -1.21
CSMD1-213ENST00000523488 TSEN15Q8WW01 171 aaKnown RBP7.52□□□□□ -1.21
CSMD1-213ENST00000523488 TMEM239Q8WW34 195 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 PTPN18Q99952 460 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 Q9N2J8 555 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 PDE7BQ9NP56 450 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 ENTPD2Q9Y5L3 495 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 CLEC3AO75596 197 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 SNRPCP09234 159 aaKnown RBP7.52□□□□□ -1.21
CSMD1-213ENST00000523488 SEC11BP0C7V7 166 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 AK4P27144 223 aaPredicted RBP7.52□□□□□ -1.21
CSMD1-213ENST00000523488 SLC6A6P31641 620 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 EGR3Q06889 387 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 TNFRSF9Q07011 255 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 PPP1R1AQ13522 171 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 TMEM35AQ53FP2 167 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 MORN1Q5T089 497 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 PRSS35Q8N3Z0 413 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 NKD1Q969G9 470 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 BPIFA2Q96DR5 249 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 PRRT1Q99946 306 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 SYT3Q9BQG1 590 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 COMMD4Q9H0A8 199 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 OPN3Q9H1Y3 402 aaPredicted RBP7.52□□□□□ -1.21
CSMD1-213ENST00000523488 OR51B6Q9H340 312 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 CENPFP49454 3210 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 F5P12259 2224 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 LOC100289279A0A1B0GTE1 492 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 GJB5O95377 273 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 CKMP06732 381 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 CAMLGP49069 296 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 DUSP2Q05923 314 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 AGERQ15109 404 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 ELOBQ15370 118 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 GUK1Q16774 197 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 SOHLH1Q5JUK2 328 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 CBLN3Q6UW01 205 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 SLC39A5Q6ZMH5 540 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 TMCO2Q7Z6W1 182 aaPredicted RBP7.52□□□□□ -1.21
CSMD1-213ENST00000523488 C17orf64Q86WR6 236 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 PFN4Q8NHR9 129 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 ZNF417Q8TAU3 575 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 TMEM230Q96A57 120 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 INTS14Q96SY0 518 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 KXD1Q9BQD3 176 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 AIF1LQ9BQI0 150 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 PBDC1Q9BVG4 233 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 CNTNAP3Q9BZ76 1288 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 ZDHHC6Q9H6R6 413 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 ZMAT3Q9HA38 289 aaKnown RBP7.52□□□□□ -1.21
CSMD1-213ENST00000523488 SAGE1Q9NXZ1 904 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 KLK13Q9UKR3 277 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 AMDHD2Q9Y303 409 aa7.52□□□□□ -1.21
CSMD1-213ENST00000523488 PCYT1BQ9Y5K3 369 aaPredicted RBP7.52□□□□□ -1.21
CSMD1-213ENST00000523488 SLC38A8A6NNN8 435 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 OR1F1O43749 312 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 HIST1H2BKO60814 126 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 CST4P01036 141 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 HIST1H2BJP06899 126 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 CKBP12277 381 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 HIST1H2BOP23527 126 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 HIST1H2BBP33778 126 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 IGFALSP35858 605 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 ID4P47928 161 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 DHPSP49366 369 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-213ENST00000523488 TNFSF10P50591 281 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 SEC13P55735 322 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 HIST1H2BDP58876 126 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 HIST1H2BCP62807 126 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 SHHQ15465 462 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 RAB11BQ15907 218 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 HIST2H2BEQ16778 126 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 POM121L1PQ3SYA9 428 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 ZNF260Q3ZCT1 412 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 ACSF3Q4G176 576 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-213ENST00000523488 EIPR1Q53HC9 387 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-213ENST00000523488 PRAMEF14Q5SWL7 426 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 GGNBP1Q5YKI7 109 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 TMEM220Q6QAJ8 160 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 CHST4Q8NCG5 386 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 OR9A1PQ8NGU1 263 aa7.51□□□□□ -1.21
CSMD1-213ENST00000523488 HIST1H2BHQ93079 126 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms