RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 LSM6P62312 80 aaKnown RBP12.89□□□□□ -0.35
MRPS28-209ENST00000522987 PAX2Q02962 417 aa12.89□□□□□ -0.35
MRPS28-209ENST00000522987 RUSC1-AS1Q66K80 236 aa12.89□□□□□ -0.35
MRPS28-209ENST00000522987 GPR139Q6DWJ6 353 aa12.89□□□□□ -0.35
MRPS28-209ENST00000522987 BTNL3Q6UXE8 466 aa12.89□□□□□ -0.35
MRPS28-209ENST00000522987 FBXW12Q6X9E4 464 aa12.89□□□□□ -0.35
MRPS28-209ENST00000522987 CFAP77Q6ZQR2 320 aa12.89□□□□□ -0.35
MRPS28-209ENST00000522987 ARPINQ7Z6K5 226 aa12.89□□□□□ -0.35
MRPS28-209ENST00000522987 OR5L1Q8NGL2 311 aa12.89□□□□□ -0.35
MRPS28-209ENST00000522987 RAB40AQ8WXH6 277 aa12.89□□□□□ -0.35
MRPS28-209ENST00000522987 APOBEC3DQ96AK3 386 aaPredicted RBP12.89□□□□□ -0.35
MRPS28-209ENST00000522987 NEIL1Q96FI4 390 aaPredicted RBP12.89□□□□□ -0.35
MRPS28-209ENST00000522987 COG8Q96MW5 612 aa12.89□□□□□ -0.35
MRPS28-209ENST00000522987 ERMAPQ96PL5 475 aaPredicted RBP12.89□□□□□ -0.35
MRPS28-209ENST00000522987 KCTD14Q9BQ13 255 aaPredicted RBP12.89□□□□□ -0.35
MRPS28-209ENST00000522987 WACQ9BTA9 647 aa12.89□□□□□ -0.35
MRPS28-209ENST00000522987 CDADC1Q9BWV3 514 aa12.89□□□□□ -0.35
MRPS28-209ENST00000522987 ARGLU1Q9NWB6 273 aaPredicted RBP12.89□□□□□ -0.35
MRPS28-209ENST00000522987 HOXA3O43365 443 aaPredicted RBP12.88□□□□□ -0.35
MRPS28-209ENST00000522987 AHCYL1O43865 530 aa12.88□□□□□ -0.35
MRPS28-209ENST00000522987 H2AFXP16104 143 aaPredicted RBP12.88□□□□□ -0.35
MRPS28-209ENST00000522987 TUBG1P23258 451 aa12.88□□□□□ -0.35
MRPS28-209ENST00000522987 PITPNBP48739 271 aa12.88□□□□□ -0.35
MRPS28-209ENST00000522987 RGS6P49758 472 aa12.88□□□□□ -0.35
MRPS28-209ENST00000522987 NUDT2P50583 147 aa12.88□□□□□ -0.35
MRPS28-209ENST00000522987 RSPO1Q2MKA7 263 aaPredicted RBP12.88□□□□□ -0.35
MRPS28-209ENST00000522987 DEFB112Q30KQ8 113 aa12.88□□□□□ -0.35
MRPS28-209ENST00000522987 RNF148Q8N7C7 305 aa12.88□□□□□ -0.35
MRPS28-209ENST00000522987 FAM156AQ8NDB6 213 aa12.88□□□□□ -0.35
MRPS28-209ENST00000522987 OR8B3Q8NGG8 313 aa12.88□□□□□ -0.35
MRPS28-209ENST00000522987 RP9Q8TA86 221 aaKnown RBP12.88□□□□□ -0.35
MRPS28-209ENST00000522987 OR8B2Q96RD0 313 aa12.88□□□□□ -0.35
MRPS28-209ENST00000522987 NMNAT3Q96T66 252 aa12.88□□□□□ -0.35
MRPS28-209ENST00000522987 SLC30A2Q9BRI3 323 aa12.88□□□□□ -0.35
MRPS28-209ENST00000522987 NUDT16L1Q9BRJ7 211 aaKnown RBP12.88□□□□□ -0.35
MRPS28-209ENST00000522987 ZNF696Q9H7X3 374 aa12.88□□□□□ -0.35
MRPS28-209ENST00000522987 MARCH7Q9H992 704 aa12.88□□□□□ -0.35
MRPS28-209ENST00000522987 TUBG2Q9NRH3 451 aa12.88□□□□□ -0.35
MRPS28-209ENST00000522987 MRGBPQ9NV56 204 aa12.88□□□□□ -0.35
MRPS28-209ENST00000522987 MIOXQ9UGB7 285 aa12.88□□□□□ -0.35
MRPS28-209ENST00000522987 FAM32AQ9Y421 112 aaKnown RBP12.88□□□□□ -0.35
MRPS28-209ENST00000522987 IQCF6A8MYZ5 107 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 FAM20BO75063 409 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 MTNR1AP48039 350 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 RPS6KA3P51812 740 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 FGF12P61328 243 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 DEFA6Q01524 100 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 MPPED2Q15777 294 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 ZNF404Q494X3 552 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 LRRN1Q6UXK5 716 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 TREML4Q6UXN2 200 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 ADCK1Q86TW2 530 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 GJC3Q8NFK1 279 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 OR10S1Q8NGN2 331 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 OR4K13Q8NH42 304 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 FANK1Q8TC84 345 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 ZDHHC16Q969W1 377 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 UPRTQ96BW1 309 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 PLEKHA8Q96JA3 519 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 TECTBQ96PL2 329 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 PITX2Q99697 317 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 COQ7Q99807 217 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 PCGF1Q9BSM1 259 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 HCAR1Q9BXC0 346 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 HDHD2Q9H0R4 259 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 MMADHCQ9H3L0 296 aaPredicted RBP12.87□□□□□ -0.35
MRPS28-209ENST00000522987 RPRD1BQ9NQG5 326 aaKnown RBP12.87□□□□□ -0.35
MRPS28-209ENST00000522987 TMEM100Q9NV29 134 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 NDUFAF4Q9P032 175 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 CLN8Q9UBY8 286 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 TMCC3Q9ULS5 477 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 B9D1Q9UPM9 204 aa12.87□□□□□ -0.35
MRPS28-209ENST00000522987 IGLV1-36A0A0B4J1U3 117 aa12.86□□□□□ -0.35
MRPS28-209ENST00000522987 C22orf46C9J442 243 aa12.86□□□□□ -0.35
MRPS28-209ENST00000522987 PLATP00750 562 aa12.86□□□□□ -0.35
MRPS28-209ENST00000522987 HLA-DQA2P01906 255 aa12.86□□□□□ -0.35
MRPS28-209ENST00000522987 LCATP04180 440 aa12.86□□□□□ -0.35
MRPS28-209ENST00000522987 ACSM4P0C7M7 580 aa12.86□□□□□ -0.35
MRPS28-209ENST00000522987 ANOS1P23352 680 aa12.86□□□□□ -0.35
MRPS28-209ENST00000522987 RPS27P42677 84 aaKnown RBP12.86□□□□□ -0.35
MRPS28-209ENST00000522987 HIST1H3AP68431 136 aa12.86□□□□□ -0.35
MRPS28-209ENST00000522987 IL13RA1P78552 427 aa12.86□□□□□ -0.35
MRPS28-209ENST00000522987 MAB21L1Q13394 359 aa12.86□□□□□ -0.35
MRPS28-209ENST00000522987 GK2Q14410 553 aaPredicted RBP12.86□□□□□ -0.35
MRPS28-209ENST00000522987 KCNMB1Q16558 191 aa12.86□□□□□ -0.35
MRPS28-209ENST00000522987 HIST2H3PS2Q5TEC6 136 aa12.86□□□□□ -0.35
MRPS28-209ENST00000522987 SFRP4Q6FHJ7 346 aaPredicted RBP12.86□□□□□ -0.35
MRPS28-209ENST00000522987 SMARCD3Q6STE5 483 aa12.86□□□□□ -0.35
MRPS28-209ENST00000522987 DPY19L2P2Q6ZN68 376 aa12.86□□□□□ -0.35
MRPS28-209ENST00000522987 HIST2H3AQ71DI3 136 aa12.86□□□□□ -0.35
MRPS28-209ENST00000522987 OR6V1Q8N148 313 aa12.86□□□□□ -0.35
MRPS28-209ENST00000522987 KIR3DL3Q8N743 410 aa12.86□□□□□ -0.35
MRPS28-209ENST00000522987 SDR9C7Q8NEX9 313 aa12.86□□□□□ -0.35
MRPS28-209ENST00000522987 SLCO4A1Q96BD0 722 aa12.86□□□□□ -0.35
MRPS28-209ENST00000522987 TMIGD2Q96BF3 282 aa12.86□□□□□ -0.35
MRPS28-209ENST00000522987 GPX7Q96SL4 187 aaPredicted RBP12.86□□□□□ -0.35
MRPS28-209ENST00000522987 ANKRD19PQ9H560 264 aa12.86□□□□□ -0.35
MRPS28-209ENST00000522987 ZMAT3Q9HA38 289 aaKnown RBP12.86□□□□□ -0.35
MRPS28-209ENST00000522987 AP3M1Q9Y2T2 418 aa12.86□□□□□ -0.35
MRPS28-209ENST00000522987 TRRAPQ9Y4A5 3859 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms