RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 PTAFRP25105 342 aa22.25■■□□□ 1.15
NKX2-1-204ENST00000522719 KIR2DL3P43628 341 aa22.25■■□□□ 1.15
NKX2-1-204ENST00000522719 ZNF283Q8N7M2 679 aa22.25■■□□□ 1.15
NKX2-1-204ENST00000522719 ACBD4Q8NC06 268 aa22.25■■□□□ 1.15
NKX2-1-204ENST00000522719 PELI1Q96FA3 418 aa22.25■■□□□ 1.15
NKX2-1-204ENST00000522719 CDH20Q9HBT6 801 aa22.25■■□□□ 1.15
NKX2-1-204ENST00000522719 ACOT13Q9NPJ3 140 aa22.25■■□□□ 1.15
NKX2-1-204ENST00000522719 ACOXLQ9NUZ1 547 aa22.25■■□□□ 1.15
NKX2-1-204ENST00000522719 BABAM2Q9NXR7 383 aa22.25■■□□□ 1.15
NKX2-1-204ENST00000522719 LSM2Q9Y333 95 aaKnown RBP22.25■■□□□ 1.15
NKX2-1-204ENST00000522719 RPSAP08865 295 aaKnown RBP22.24■■□□□ 1.15
NKX2-1-204ENST00000522719 ACSM4P0C7M7 580 aa22.24■■□□□ 1.15
NKX2-1-204ENST00000522719 MAP2K4P45985 399 aa22.24■■□□□ 1.15
NKX2-1-204ENST00000522719 CX3CR1P49238 355 aa22.24■■□□□ 1.15
NKX2-1-204ENST00000522719 MMP16P51512 607 aa22.24■■□□□ 1.15
NKX2-1-204ENST00000522719 PRKXP51817 358 aa22.24■■□□□ 1.15
NKX2-1-204ENST00000522719 GBX2P52951 348 aaPredicted RBP22.24■■□□□ 1.15
NKX2-1-204ENST00000522719 PSMA6P60900 246 aaKnown RBP22.24■■□□□ 1.15
NKX2-1-204ENST00000522719 SPHARQ15513 63 aa22.24■■□□□ 1.15
NKX2-1-204ENST00000522719 ARL9Q6T311 187 aa22.24■■□□□ 1.15
NKX2-1-204ENST00000522719 FAM222BQ8WU58 562 aa22.24■■□□□ 1.15
NKX2-1-204ENST00000522719 GATAD2BQ8WXI9 593 aa22.24■■□□□ 1.15
NKX2-1-204ENST00000522719 FCGR1BQ92637 280 aa22.24■■□□□ 1.15
NKX2-1-204ENST00000522719 DOK1Q99704 481 aa22.24■■□□□ 1.15
NKX2-1-204ENST00000522719 R4GMQ9 66 aa22.24■■□□□ 1.15
NKX2-1-204ENST00000522719 TMEM269A0A1B0GVZ9 245 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 ACOD1A6NK06 481 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 TRIM64CA6NLI5 447 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 ZNF35P13682 527 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 PCMT1P22061 227 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 CCNOP22674 350 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 CD40P25942 277 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 NAAAQ02083 359 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 ESRP2Q9H6T0 727 aaKnown RBP22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 SP140LQ9H930 580 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 TRIM36Q9NQ86 728 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 CADP27708 2225 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 PRSS44E7EML9 344 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 ICMTO60725 284 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 SRSF10O75494 262 aaKnown RBP22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 RPP14O95059 124 aaKnown RBP22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 CRYAAP02489 173 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 CCL2P13500 99 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 SLC6A9P48067 706 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 RGS6P49758 472 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 ACSM1Q08AH1 577 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 MED22Q15528 200 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 CCDC58Q4VC31 144 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 FDX2Q6P4F2 183 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 RORBQ92753 470 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 C4orf45Q96LM5 186 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 KCNS3Q9BQ31 491 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 VCX3AQ9NNX9 186 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 CRIM1Q9NZV1 1036 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 EIF3KQ9UBQ5 218 aaKnown RBP22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 GRIP1Q9Y3R0 1128 aa22.23■■□□□ 1.15
NKX2-1-204ENST00000522719 IGHV2OR16-5A0A0B4J2B6 119 aa22.22■■□□□ 1.15
NKX2-1-204ENST00000522719 PCSK6P29122 969 aa22.22■■□□□ 1.15
NKX2-1-204ENST00000522719 TGM4P49221 684 aa22.22■■□□□ 1.15
NKX2-1-204ENST00000522719 ZNF121P58317 390 aaPredicted RBP22.22■■□□□ 1.15
NKX2-1-204ENST00000522719 TAS2R43P59537 309 aa22.22■■□□□ 1.15
NKX2-1-204ENST00000522719 BDH1Q02338 343 aa22.22■■□□□ 1.15
NKX2-1-204ENST00000522719 BEX5Q5H9J7 111 aa22.22■■□□□ 1.15
NKX2-1-204ENST00000522719 ZNF544Q6NX49 715 aa22.22■■□□□ 1.15
NKX2-1-204ENST00000522719 ZNF367Q7RTV3 350 aa22.22■■□□□ 1.15
NKX2-1-204ENST00000522719 KLBQ86Z14 1044 aa22.22■■□□□ 1.15
NKX2-1-204ENST00000522719 OR5M11Q96RB7 305 aa22.22■■□□□ 1.15
NKX2-1-204ENST00000522719 C1QTNF5Q9BXJ0 243 aa22.22■■□□□ 1.15
NKX2-1-204ENST00000522719 MOB1AQ9H8S9 216 aa22.22■■□□□ 1.15
NKX2-1-204ENST00000522719 FAM206AQ9NX38 181 aa22.22■■□□□ 1.15
NKX2-1-204ENST00000522719 DPRXA6NFQ7 191 aa22.21■■□□□ 1.15
NKX2-1-204ENST00000522719 LOC110117498-PIK3R3F6TDL0 507 aa22.21■■□□□ 1.15
NKX2-1-204ENST00000522719 J3QW42 95 aa22.21■■□□□ 1.15
NKX2-1-204ENST00000522719 HGFACQ04756 655 aa22.21■■□□□ 1.15
NKX2-1-204ENST00000522719 NCMAPQ5T1S8 102 aa22.21■■□□□ 1.15
NKX2-1-204ENST00000522719 UBE2UQ5VVX9 321 aa22.21■■□□□ 1.15
NKX2-1-204ENST00000522719 UNQ6126/PRO20091Q6UXV3 157 aa22.21■■□□□ 1.15
NKX2-1-204ENST00000522719 COLCA1Q6ZS62 124 aa22.21■■□□□ 1.15
NKX2-1-204ENST00000522719 PAQR4Q8N4S7 273 aaPredicted RBP22.21■■□□□ 1.15
NKX2-1-204ENST00000522719 SPOCK3Q9BQ16 436 aa22.21■■□□□ 1.15
NKX2-1-204ENST00000522719 MRPS26Q9BYN8 205 aaKnown RBP22.21■■□□□ 1.15
NKX2-1-204ENST00000522719 ISYNA1Q9NPH2 558 aa22.21■■□□□ 1.15
NKX2-1-204ENST00000522719 TBCCD1Q9NVR7 557 aa22.21■■□□□ 1.15
NKX2-1-204ENST00000522719 LRRK2Q5S007 2527 aa22.21■■□□□ 1.15
NKX2-1-204ENST00000522719 ADGRG4Q8IZF6 3080 aa22.2■■□□□ 1.14
NKX2-1-204ENST00000522719 PNPP00491 289 aa22.2■■□□□ 1.14
NKX2-1-204ENST00000522719 SMIM18P0DKX4 95 aa22.2■■□□□ 1.14
NKX2-1-204ENST00000522719 ATP6V1B1P15313 513 aa22.2■■□□□ 1.14
NKX2-1-204ENST00000522719 PSMB10P40306 273 aa22.2■■□□□ 1.14
NKX2-1-204ENST00000522719 NR1H2P55055 460 aa22.2■■□□□ 1.14
NKX2-1-204ENST00000522719 BSPH1Q075Z2 132 aa22.2■■□□□ 1.14
NKX2-1-204ENST00000522719 RPL22L1Q6P5R6 122 aaKnown RBP22.2■■□□□ 1.14
NKX2-1-204ENST00000522719 MEX3BQ6ZN04 569 aaKnown RBP22.2■■□□□ 1.14
NKX2-1-204ENST00000522719 KCTD8Q6ZWB6 473 aa22.2■■□□□ 1.14
NKX2-1-204ENST00000522719 PRSS45Q7RTY3 260 aa22.2■■□□□ 1.14
NKX2-1-204ENST00000522719 NAA40Q86UY6 237 aa22.2■■□□□ 1.14
NKX2-1-204ENST00000522719 OR52H1Q8NGJ2 320 aa22.2■■□□□ 1.14
NKX2-1-204ENST00000522719 RNF166Q96A37 237 aaPredicted RBP22.2■■□□□ 1.14
NKX2-1-204ENST00000522719 APOBEC3DQ96AK3 386 aaPredicted RBP22.2■■□□□ 1.14
NKX2-1-204ENST00000522719 HELZ2Q9BYK8 2649 aaKnown RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms