RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 PCK2Q16822 640 aa15.19■□□□□ 0.02
CLK4-211ENST00000522556 CPOQ8IVL8 374 aa15.19■□□□□ 0.02
CLK4-211ENST00000522556 OR5AS1Q8N127 324 aa15.19■□□□□ 0.02
CLK4-211ENST00000522556 ST7LQ8TDW4 575 aa15.19■□□□□ 0.02
CLK4-211ENST00000522556 PKP2Q99959 881 aa15.19■□□□□ 0.02
CLK4-211ENST00000522556 GABARAPL1Q9H0R8 117 aa15.19■□□□□ 0.02
CLK4-211ENST00000522556 NARFLQ9H6Q4 476 aa15.19■□□□□ 0.02
CLK4-211ENST00000522556 ZNF275Q9NSD4 429 aaPredicted RBP15.19■□□□□ 0.02
CLK4-211ENST00000522556 TREM2Q9NZC2 230 aa15.19■□□□□ 0.02
CLK4-211ENST00000522556 TMEFF2Q9UIK5 374 aaPredicted RBP15.19■□□□□ 0.02
CLK4-211ENST00000522556 MALRD1Q5VYJ5 2156 aa15.18■□□□□ 0.02
CLK4-211ENST00000522556 ANK3Q12955 4377 aaKnown RBP15.18■□□□□ 0.02
CLK4-211ENST00000522556 G3V2T6 193 aa15.18■□□□□ 0.02
CLK4-211ENST00000522556 H3BSA7 217 aa15.18■□□□□ 0.02
CLK4-211ENST00000522556 TIMM8AO60220 97 aaPredicted RBP15.18■□□□□ 0.02
CLK4-211ENST00000522556 SLC2A1P11166 492 aa15.18■□□□□ 0.02
CLK4-211ENST00000522556 SLC2A5P22732 501 aa15.18■□□□□ 0.02
CLK4-211ENST00000522556 RIPPLY3P57055 190 aa15.18■□□□□ 0.02
CLK4-211ENST00000522556 SNAI3Q3KNW1 292 aa15.18■□□□□ 0.02
CLK4-211ENST00000522556 KDM4DQ6B0I6 523 aa15.18■□□□□ 0.02
CLK4-211ENST00000522556 OR2T2Q6IF00 324 aa15.18■□□□□ 0.02
CLK4-211ENST00000522556 ARL9Q6T311 187 aa15.18■□□□□ 0.02
CLK4-211ENST00000522556 COLCA1Q6ZS62 124 aa15.18■□□□□ 0.02
CLK4-211ENST00000522556 BCDIN3DQ7Z5W3 292 aaKnown RBP15.18■□□□□ 0.02
CLK4-211ENST00000522556 ERI1Q8IV48 349 aaKnown RBP15.18■□□□□ 0.02
CLK4-211ENST00000522556 OR6N2Q8NGY6 317 aa15.18■□□□□ 0.02
CLK4-211ENST00000522556 DDX28Q9NUL7 540 aaKnown RBP15.18■□□□□ 0.02
CLK4-211ENST00000522556 DCAF16Q9NXF7 216 aa15.18■□□□□ 0.02
CLK4-211ENST00000522556 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.18■□□□□ 0.02
CLK4-211ENST00000522556 OAZ3Q9UMX2 235 aa15.18■□□□□ 0.02
CLK4-211ENST00000522556 KLHDC2Q9Y2U9 406 aa15.18■□□□□ 0.02
CLK4-211ENST00000522556 ZFHX3Q15911 3703 aa15.18■□□□□ 0.02
CLK4-211ENST00000522556 SONP18583 2426 aaKnown RBP15.17■□□□□ 0.02
CLK4-211ENST00000522556 PRR23D1E9PI22 279 aaPredicted RBP15.17■□□□□ 0.02
CLK4-211ENST00000522556 M0R135 149 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 EBAG9O00559 213 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 CD5LO43866 347 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 PRKYO43930 277 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 GLCEO94923 617 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 PRR23D2P0DMB1 279 aaPredicted RBP15.17■□□□□ 0.02
CLK4-211ENST00000522556 GSTT1P30711 240 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 POLR2IP36954 125 aaKnown RBP15.17■□□□□ 0.02
CLK4-211ENST00000522556 NAA10P41227 235 aaPredicted RBP15.17■□□□□ 0.02
CLK4-211ENST00000522556 PTGES3Q15185 160 aaKnown RBP15.17■□□□□ 0.02
CLK4-211ENST00000522556 KLHL12Q53G59 568 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 UNQ6126/PRO20091Q6UXV3 157 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 USP51Q70EK9 711 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 DPY19L4Q7Z388 723 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 HIPK1Q86Z02 1210 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 TIGD4Q8IY51 512 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 PARP8Q8N3A8 854 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 RDH5Q92781 318 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 APOBEC3DQ96AK3 386 aaPredicted RBP15.17■□□□□ 0.02
CLK4-211ENST00000522556 SLAMF6Q96DU3 332 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 ZNF799Q96GE5 643 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 POM121Q96HA1 1249 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 DCLRE1CQ96SD1 692 aaKnown RBP15.17■□□□□ 0.02
CLK4-211ENST00000522556 INTS14Q96SY0 518 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 CIB1Q99828 191 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 C1QTNF5Q9BXJ0 243 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 MARCH7Q9H992 704 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 KRT84Q9NSB2 600 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 CENPMQ9NSP4 180 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 TVP23BQ9NYZ1 205 aa15.17■□□□□ 0.02
CLK4-211ENST00000522556 CCDC182A6NF36 153 aa15.16■□□□□ 0.02
CLK4-211ENST00000522556 FCGR1AP12314 374 aa15.16■□□□□ 0.02
CLK4-211ENST00000522556 KITLGP21583 273 aa15.16■□□□□ 0.02
CLK4-211ENST00000522556 ACHEP22303 614 aa15.16■□□□□ 0.02
CLK4-211ENST00000522556 OTX1P32242 354 aaPredicted RBP15.16■□□□□ 0.02
CLK4-211ENST00000522556 PRKXP51817 358 aa15.16■□□□□ 0.02
CLK4-211ENST00000522556 EIF2B1Q14232 305 aaKnown RBP15.16■□□□□ 0.02
CLK4-211ENST00000522556 AVPI1Q5T686 147 aa15.16■□□□□ 0.02
CLK4-211ENST00000522556 FBXW12Q6X9E4 464 aa15.16■□□□□ 0.02
CLK4-211ENST00000522556 CXXC5Q7LFL8 322 aaKnown RBP15.16■□□□□ 0.02
CLK4-211ENST00000522556 ZDHHC13Q8IUH4 622 aa15.16■□□□□ 0.02
CLK4-211ENST00000522556 BHLHE23Q8NDY6 225 aa15.16■□□□□ 0.02
CLK4-211ENST00000522556 OR2AE1Q8NHA4 323 aa15.16■□□□□ 0.02
CLK4-211ENST00000522556 HAVCR1Q96D42 359 aa15.16■□□□□ 0.02
CLK4-211ENST00000522556 COPS4Q9BT78 406 aa15.16■□□□□ 0.02
CLK4-211ENST00000522556 ABHD6Q9BV23 337 aa15.16■□□□□ 0.02
CLK4-211ENST00000522556 CHODLQ9H9P2 273 aa15.16■□□□□ 0.02
CLK4-211ENST00000522556 YAE1D1Q9NRH1 226 aa15.16■□□□□ 0.02
CLK4-211ENST00000522556 NKIRAS2Q9NYR9 191 aa15.16■□□□□ 0.02
CLK4-211ENST00000522556 GPR160Q9UJ42 338 aa15.16■□□□□ 0.02
CLK4-211ENST00000522556 HIVEP2P31629 2446 aa15.15■□□□□ 0.02
CLK4-211ENST00000522556 PLSCR5A0PG75 271 aa15.15■□□□□ 0.02
CLK4-211ENST00000522556 H0YL77 283 aa15.15■□□□□ 0.02
CLK4-211ENST00000522556 TPD52L2O43399 206 aaKnown RBP15.15■□□□□ 0.02
CLK4-211ENST00000522556 LCATP04180 440 aa15.15■□□□□ 0.02
CLK4-211ENST00000522556 HMGN1P05114 100 aa15.15■□□□□ 0.02
CLK4-211ENST00000522556 PAICSP22234 425 aaKnown RBP15.15■□□□□ 0.02
CLK4-211ENST00000522556 SLC6A9P48067 706 aa15.15■□□□□ 0.02
CLK4-211ENST00000522556 RGS6P49758 472 aa15.15■□□□□ 0.02
CLK4-211ENST00000522556 HCCSP53701 268 aa15.15■□□□□ 0.02
CLK4-211ENST00000522556 PPP2R2BQ00005 443 aa15.15■□□□□ 0.02
CLK4-211ENST00000522556 ECH1Q13011 328 aa15.15■□□□□ 0.02
CLK4-211ENST00000522556 APOFQ13790 326 aa15.15■□□□□ 0.02
CLK4-211ENST00000522556 GK2Q14410 553 aaPredicted RBP15.15■□□□□ 0.02
CLK4-211ENST00000522556 SNAPC1Q16533 368 aa15.15■□□□□ 0.02
CLK4-211ENST00000522556 TEX30Q5JUR7 227 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms