RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 DDB2Q92466 427 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 AP3S1Q92572 193 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 FRAT1Q92837 279 aaPredicted RBP3.25□□□□□ -1.89
SKP1-209ENST00000522552 TMEM54Q969K7 222 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 SMIM19Q96E16 107 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 PRAC1Q96KF2 57 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 WFIKKN1Q96NZ8 548 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 ZNF300Q96RE9 604 aaPredicted RBP3.25□□□□□ -1.89
SKP1-209ENST00000522552 STACQ99469 402 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 GPR21Q99679 349 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 RASL11BQ9BPW5 248 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 PDCD1LG2Q9BQ51 273 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 OSBPL11Q9BXB4 747 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 SCAND2PQ9GZW5 306 aaPredicted RBP3.25□□□□□ -1.89
SKP1-209ENST00000522552 ZNF71Q9NQZ8 489 aaPredicted RBP3.25□□□□□ -1.89
SKP1-209ENST00000522552 ABCC13Q9NSE7 274 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 IL17CQ9P0M4 197 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 TMEM181Q9P2C4 612 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 UVRAGQ9P2Y5 699 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 STOML2Q9UJZ1 356 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 CES1P1Q9UKY3 287 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 MGAT4AQ9UM21 535 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 ASF1AQ9Y294 204 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 MMACHCQ9Y4U1 282 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 OR51B2Q9Y5P1 312 aa3.25□□□□□ -1.89
SKP1-209ENST00000522552 IGHV1OR21-1A0A087WYE8 117 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 TEX48A0A1B0GUV7 120 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 GJE1A6NN92 205 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 C21orf140B9A014 251 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 ANKRD65E5RJM6 399 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 C16orf97H3BN30 126 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 K7EQG2 157 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 ZNF593O00488 134 aaPredicted RBP3.24□□□□□ -1.89
SKP1-209ENST00000522552 ACOX3O15254 700 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 PRSS1P07477 247 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 C8orf88P0DMB2 117 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 DTYMKP23919 212 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 ADORA2BP29275 332 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 GDF5P43026 501 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 BTDP43251 543 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 GALR1P47211 349 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 ARL6IP1Q15041 203 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 CCL14Q16627 93 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 TBC1D28Q2M2D7 210 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 C14orf28Q4W4Y0 310 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 HBMQ6B0K9 141 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 CCDC121Q6ZUS5 278 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 S100A7AQ86SG5 101 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 TMEM135Q86UB9 458 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 NFE4Q86UQ8 179 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 TRAPPC5Q8IUR0 188 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 RDH10Q8IZV5 341 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 METTL27Q8N6F8 245 aaPredicted RBP3.24□□□□□ -1.89
SKP1-209ENST00000522552 CCDC54Q8NEL0 328 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 OR8G5Q8NG78 346 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 OR13A1Q8NGR1 328 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 OR10R2Q8NGX6 335 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 APH1BQ8WW43 257 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 RCN3Q96D15 328 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 SNF8Q96H20 258 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 TMEM56Q96MV1 263 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 EBNA1BP2Q99848 306 aaKnown RBP3.24□□□□□ -1.89
SKP1-209ENST00000522552 PRRT1Q99946 306 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 APOL4Q9BPW4 351 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 C20orf144Q9BQM9 153 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 NUDT9Q9BW91 350 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 CDCA4Q9BXL8 241 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 ARL6Q9H0F7 186 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 NDE1Q9NXR1 346 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 KCNIP1Q9NZI2 227 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 TAAR2Q9P1P5 351 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 AP3M1Q9Y2T2 418 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 IGHV4-4A0A075B6R2 117 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 TRGV8A0A0C4DH27 118 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 A0A0G2JLM5 398 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 RBMY1BA6NDE4 496 aaKnown RBP3.24□□□□□ -1.89
SKP1-209ENST00000522552 RBMY1EA6NEQ0 496 aaKnown RBP3.24□□□□□ -1.89
SKP1-209ENST00000522552 ARGFXA6NJG6 315 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 K7ENP7 123 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 CCRL2O00421 344 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 HPRT1P00492 218 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 RBMY1DP0C7P1 496 aaKnown RBP3.24□□□□□ -1.89
SKP1-209ENST00000522552 RBMY1A1P0DJD3 496 aaKnown RBP3.24□□□□□ -1.89
SKP1-209ENST00000522552 CELP19835 753 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 OPRL1P41146 370 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 GPR6P46095 362 aaPredicted RBP3.24□□□□□ -1.89
SKP1-209ENST00000522552 AP2S1P53680 142 aaPredicted RBP3.24□□□□□ -1.89
SKP1-209ENST00000522552 RAB8AP61006 207 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 RPL18AQ02543 176 aaKnown RBP3.24□□□□□ -1.89
SKP1-209ENST00000522552 FCHO2Q0JRZ9 810 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 TEAD2Q15562 447 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 TRIP13Q15645 432 aaPredicted RBP3.24□□□□□ -1.89
SKP1-209ENST00000522552 UFSP1Q6NVU6 142 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 GDPD3Q7L5L3 318 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 TAC4Q86UU9 113 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 CALHM1Q8IU99 346 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 NRMQ8IXM6 262 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 DAW1Q8N136 415 aa3.24□□□□□ -1.89
SKP1-209ENST00000522552 RIBC1Q8N443 379 aaPredicted RBP3.24□□□□□ -1.89
SKP1-209ENST00000522552 RAB42Q8N4Z0 105 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms