RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 LHX6Q9UPM6 363 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 ST8SIA3O43173 380 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 SCO1O75880 301 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 ZNF547Q8IVP9 402 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 OR51A4Q8NGJ6 313 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 OR6K3Q8NGY3 331 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 SPACA5Q96QH8 159 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 SLC25A32Q9H2D1 315 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 NARFLQ9H6Q4 476 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 ADGRL4Q9HBW9 690 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 MED29Q9NX70 200 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 SLCO1C1Q9NYB5 712 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 MYOTQ9UBF9 498 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 R4GMQ9 66 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 RAB19A4D1S5 217 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 XRCC3O43542 346 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 GSTZ1O43708 216 aaPredicted RBP12.51□□□□□ -0.41
SYNPO-205ENST00000522122 ATF1P18846 271 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 RBMS3Q6XE24 437 aaKnown RBP12.51□□□□□ -0.41
SYNPO-205ENST00000522122 TMEM217Q8N7C4 229 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 SUMF1Q8NBK3 374 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 OR4C16Q8NGL9 310 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 OR5M1Q8NGP8 315 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 ZNF576Q9H609 170 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 ZNF629Q9UEG4 869 aaPredicted RBP12.51□□□□□ -0.41
SYNPO-205ENST00000522122 B9D1Q9UPM9 204 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 SBF1O95248 1867 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 OR6C76A6NM76 312 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 WNT1P04628 370 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 IL5P05113 134 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 LAP3P28838 519 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 EXT1Q16394 746 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 LINC01555Q8NAE3 123 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 OR4N2Q8NGD1 307 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 TMED6Q8WW62 240 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 C19orf12Q9NSK7 152 aa12.51□□□□□ -0.41
SYNPO-205ENST00000522122 PCYT1BQ9Y5K3 369 aaPredicted RBP12.51□□□□□ -0.41
SYNPO-205ENST00000522122 PTPRZ1P23471 2315 aaPredicted RBP12.5□□□□□ -0.41
SYNPO-205ENST00000522122 OIP5O43482 229 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 ZIC1Q15915 447 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 LINC00303Q3SY05 128 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 OTPQ5XKR4 325 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 GPR84Q9NQS5 396 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 SLC39A9Q9NUM3 307 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 A0A0B4J2E0 115 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 A0A1B0GX12 115 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 A0A1W2PNR3 127 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 OTOL1A6NHN0 477 aaPredicted RBP12.5□□□□□ -0.41
SYNPO-205ENST00000522122 NKX2-2O95096 273 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 RBP2P50120 134 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 HTD2P86397 168 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 AKR1C1Q04828 323 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 PCK2Q16822 640 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 ATPAF1Q5TC12 328 aaPredicted RBP12.5□□□□□ -0.41
SYNPO-205ENST00000522122 ADGRG3Q86Y34 549 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 KIRREL1Q96J84 757 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 NIPSNAP3BQ9BS92 247 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 GAREM1Q9H706 876 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 PPP1R3EQ9H7J1 279 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 SIT1Q9Y3P8 196 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 HRH3Q9Y5N1 445 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 LINC00862A6NCI5 91 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 ZNF587BE7ETH6 402 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 CTDSPLO15194 276 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 POC1BQ8TC44 478 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 CDCP1Q9H5V8 836 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 CTSFQ9UBX1 484 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 A0A1W2PPC4 97 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 TBPP20226 339 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 SHHQ15465 462 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 ZXDCQ2QGD7 858 aaPredicted RBP12.5□□□□□ -0.41
SYNPO-205ENST00000522122 C19orf48Q6RUI8 117 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 RELL2Q8NC24 303 aaPredicted RBP12.5□□□□□ -0.41
SYNPO-205ENST00000522122 PBX4Q9BYU1 374 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 C20orf141Q9NUB4 165 aa12.5□□□□□ -0.41
SYNPO-205ENST00000522122 OR2W5A6NFC9 320 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 SLC17A2O00624 439 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 GUSBP08236 651 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 CASP6P55212 293 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 FAM209AQ5JX71 171 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 OR51A2Q8NGJ7 313 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 OR13C8Q8NGS7 320 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 PELI1Q96FA3 418 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 GPR137Q96N19 417 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 SLC22A11Q9NSA0 550 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 SLC5A6Q9Y289 635 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 RP1P56715 2156 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 FRG2CA6NGY1 282 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 SDCBPO00560 298 aaPredicted RBP12.49□□□□□ -0.41
SYNPO-205ENST00000522122 TAAR5O14804 337 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 HLA-DQB1P01920 261 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 ADRB1P08588 477 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 TNFSF4P23510 183 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 GFERP55789 205 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 SSBP1Q04837 148 aaKnown RBP12.49□□□□□ -0.41
SYNPO-205ENST00000522122 CDH26Q8IXH8 852 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 MRPL41Q8IXM3 137 aaKnown RBP12.49□□□□□ -0.41
SYNPO-205ENST00000522122 DND1Q8IYX4 353 aaKnown RBP12.49□□□□□ -0.41
SYNPO-205ENST00000522122 SPICQ8N5J4 248 aa12.49□□□□□ -0.41
SYNPO-205ENST00000522122 NKX6-2Q9C056 277 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms