RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 A0A0A6YYD5 115 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 A0A0J9YXY3 114 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 ANKRD20A5PA0PJZ0 165 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 HIDE1A8MVS5 230 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 CDK14O94921 469 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 RAB3DO95716 219 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 HOXC4P09017 264 aaPredicted RBP2.85□□□□□ -1.95
SQLE-204ENST00000520493 OR8U9P0C7N5 309 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 USF1P22415 310 aaPredicted RBP2.85□□□□□ -1.95
SQLE-204ENST00000520493 WARSP23381 471 aaKnown RBP2.85□□□□□ -1.95
SQLE-204ENST00000520493 CCNE1P24864 410 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 MAS1LP35410 378 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 CSNK1A1P48729 337 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 RND2P52198 227 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 SIGLEC14Q08ET2 396 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 ART3Q13508 389 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 TNXAQ16473 311 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 SGCAQ16586 387 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 CHRFAM7AQ494W8 412 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 THEM4Q5T1C6 240 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 OTPQ5XKR4 325 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 OAFQ86UD1 273 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 RALGPS2Q86X27 583 aaPredicted RBP2.85□□□□□ -1.95
SQLE-204ENST00000520493 TMEM61Q8N0U2 210 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 MREGQ8N565 214 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 LINC00469Q8N7U9 141 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 OR8U1Q8NH10 309 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 FAM3DQ96BQ1 224 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 AURKBQ96GD4 344 aaPredicted RBP2.85□□□□□ -1.95
SQLE-204ENST00000520493 ARL5BQ96KC2 179 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 GABARAPL3Q9BY60 117 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 PARVGQ9HBI0 331 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 SLC39A1Q9NY26 324 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 VAPAQ9P0L0 249 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 ZNF629Q9UEG4 869 aaPredicted RBP2.85□□□□□ -1.95
SQLE-204ENST00000520493 KIF25-AS1Q9Y6Z4 181 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 FHOD3Q2V2M9 1422 aa2.85□□□□□ -1.95
SQLE-204ENST00000520493 ARHGAP23Q9P227 1491 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 ANKRD65E5RJM6 399 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 HAT1O14929 419 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 SCN2BO60939 215 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 ALOX12BO75342 701 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 CBR3O75828 277 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 SC5DO75845 299 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 TRAPPC6AO75865 159 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 TPM3P06753 285 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 RETP07949 1114 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 OR5H8P0DN80 308 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 IGFBP3P17936 291 aaPredicted RBP2.84□□□□□ -1.95
SQLE-204ENST00000520493 GGT1P19440 569 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 RAB3BP20337 219 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 PFN2P35080 140 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 HTR2BP41595 481 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 AP1S2P56377 157 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 PRPS1P60891 318 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 TPM4P67936 248 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 RPL18AQ02543 176 aaKnown RBP2.84□□□□□ -1.95
SQLE-204ENST00000520493 TCP10Q12799 353 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 COTL1Q14019 142 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 CCDC122Q5T0U0 273 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 CPTPQ5TA50 214 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 DUPD1Q68J44 220 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 ZNF470Q6ECI4 717 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 ABHD13Q7L211 337 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 FAM71AQ8IYT1 594 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 CBR4Q8N4T8 237 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 NPWQ8N729 165 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 CHST4Q8NCG5 386 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 OR5AR1Q8NGP9 310 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 OR4S2Q8NH73 311 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 MCOLN3Q8TDD5 553 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.84□□□□□ -1.95
SQLE-204ENST00000520493 GALNT14Q96FL9 552 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 TMEM101Q96IK0 257 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 BTN2A3PQ96KV6 586 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 ZNF681Q96N22 645 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 SCGB3A2Q96PL1 93 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 LLPHQ9BRT6 129 aaKnown RBP2.84□□□□□ -1.95
SQLE-204ENST00000520493 FRMD8P1Q9BZ68 369 aaPredicted RBP2.84□□□□□ -1.95
SQLE-204ENST00000520493 PORCNQ9H237 461 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 LINC00597Q9H2U6 94 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 NECAP2Q9NVZ3 263 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 RMND1Q9NWS8 449 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 MTRF1LQ9UGC7 380 aaKnown RBP2.84□□□□□ -1.95
SQLE-204ENST00000520493 CLEC2DQ9UHP7 191 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 ENPP5Q9UJA9 477 aa2.84□□□□□ -1.95
SQLE-204ENST00000520493 MROH7Q68CQ1 1323 aa2.84□□□□□ -1.96
SQLE-204ENST00000520493 IGLV1-36A0A0B4J1U3 117 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 A0A1B0GW15 77 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 MGAT4DA6NG13 374 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 TRPC5OSA6NMA1 111 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 SEC14L6B5MCN3 397 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 ANKRD63C9JTQ0 380 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 F8VP50 259 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 H7C2Y5 167 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 GABRPO00591 440 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 HDAC3O15379 428 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 LY6G6DO95868 133 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 P2RY2P41231 377 aa2.83□□□□□ -1.96
SQLE-204ENST00000520493 CRATP43155 626 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms