RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 SIAEQ9HAT2 523 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 UGT1A7Q9HAW7 530 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 UGT1A10Q9HAW8 530 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 UGT1A8Q9HAW9 530 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 C6orf50Q9HD87 102 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 ACP6Q9NPH0 428 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 PITPNC1Q9UKF7 332 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 PRELID1Q9Y255 219 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 FOCADQ5VW36 1801 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 A0A087WXM4 84 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 GSTTP1A0A1W2PQM5 241 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 I3L4J1 428 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 M0QX08 132 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 SLC37A4O43826 429 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 P0C879 139 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 RCVRNP35243 200 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 RGS8P57771 180 aaPredicted RBP5.44□□□□□ -1.54
LSM1-202ENST00000520286 CSNK1G2P78368 415 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 CDC20Q12834 499 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 C6orf52Q5T4I8 152 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 NIPA1Q7RTP0 329 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 MYPOPQ86VE0 399 aaPredicted RBP5.44□□□□□ -1.54
LSM1-202ENST00000520286 CLVS1Q8IUQ0 354 aaPredicted RBP5.44□□□□□ -1.54
LSM1-202ENST00000520286 ZNF100Q8IYN0 542 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 C6orf223Q8N319 242 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 B3GNT7Q8NFL0 401 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 PLPPR1Q8TBJ4 325 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 SDR42E1Q8WUS8 393 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 GIMAP1Q8WWP7 306 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 RMND5BQ96G75 393 aaPredicted RBP5.44□□□□□ -1.54
LSM1-202ENST00000520286 MS4A4EQ96PG1 132 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 NAT9Q9BTE0 207 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 FAM96AQ9H5X1 160 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 C12orf10Q9HB07 376 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 PARVGQ9HBI0 331 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 PARVAQ9NVD7 372 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 ARMC1Q9NVT9 282 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 DMAC2Q9NW81 257 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 VNN3Q9NY84 501 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 CD274Q9NZQ7 290 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 BTNL2Q9UIR0 455 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 CLEC4EQ9ULY5 219 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 MMP17Q9ULZ9 603 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 AP4S1Q9Y587 144 aa5.44□□□□□ -1.54
LSM1-202ENST00000520286 FAM168BA1KXE4 195 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 H0YIV9 168 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 ACOX3O15254 700 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 NMT2O60551 498 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 CTAG2O75638 210 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 SNAPINO95295 136 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 C1QAP02745 245 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 FGF1P05230 155 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 ZNF43P17038 809 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 TBPP20226 339 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 PSMB1P20618 241 aaKnown RBP5.43□□□□□ -1.54
LSM1-202ENST00000520286 M6PRP20645 277 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 ERFP50548 548 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 TMBIM6P55061 237 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 AQP5P55064 265 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 YWHAGP61981 247 aaKnown RBP eCLIP5.43□□□□□ -1.54
LSM1-202ENST00000520286 SELENOTP62341 195 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 ESRRGP62508 458 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 SLC25A30Q5SVS4 291 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 CCNJQ5T5M9 372 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 PRSS41Q7RTY9 318 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 LUZP2Q86TE4 346 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 SETD3Q86TU7 594 aaPredicted RBP5.43□□□□□ -1.54
LSM1-202ENST00000520286 CRLF3Q8IUI8 442 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 PIANPQ8IYJ0 282 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 KATNAL2Q8IYT4 538 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 GPD1LQ8N335 351 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 GPR151Q8TDV0 419 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 ACMSDQ8TDX5 336 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 CMTM5Q96DZ9 223 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 ITCHQ96J02 903 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 ZNF578Q96N58 590 aaPredicted RBP5.43□□□□□ -1.54
LSM1-202ENST00000520286 MBOAT7Q96N66 472 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 OR8B4Q96RC9 309 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 EBF4Q9BQW3 602 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 C1orf50Q9BV19 199 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 SLC38A10Q9HBR0 1119 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 FKBP14Q9NWM8 211 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 MARCH5Q9NX47 278 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 KCNIP1Q9NZI2 227 aa5.43□□□□□ -1.54
LSM1-202ENST00000520286 LAMA2P24043 3122 aaKnown RBP5.42□□□□□ -1.54
LSM1-202ENST00000520286 CDH23Q9H251 3354 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 MUC6Q6W4X9 2439 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 A0A1W2PQ67 120 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 SMCO2A6NFE2 343 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 EPOPA6NHQ4 379 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 NCF1BA6NI72 391 aaPredicted RBP5.42□□□□□ -1.54
LSM1-202ENST00000520286 NCF1CA8MVU1 366 aaPredicted RBP5.42□□□□□ -1.54
LSM1-202ENST00000520286 TMX2-CTNND1H3BSU7 103 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 J3QRK9 145 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 DLGAP1O14490 977 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 GOSR2O14653 212 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 CLPXO76031 633 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 TDP2O95551 362 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 HSPB1P04792 205 aaKnown RBP5.42□□□□□ -1.54
LSM1-202ENST00000520286 BPGMP07738 259 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms