RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 SRSF5Q13243 272 aaKnown RBP3.06□□□□□ -1.92
PTPN12-213ENST00000519553 KIR2DS1Q14954 304 aa3.06□□□□□ -1.92
PTPN12-213ENST00000519553 CMC1Q7Z7K0 106 aa3.06□□□□□ -1.92
PTPN12-213ENST00000519553 APH1BQ8WW43 257 aa3.06□□□□□ -1.92
PTPN12-213ENST00000519553 RTN4IP1Q8WWV3 396 aaPredicted RBP3.06□□□□□ -1.92
PTPN12-213ENST00000519553 CCDC77Q9BR77 488 aa3.06□□□□□ -1.92
PTPN12-213ENST00000519553 ZNF717Q9BY31 904 aaPredicted RBP3.06□□□□□ -1.92
PTPN12-213ENST00000519553 SLC17A4Q9Y2C5 497 aa3.06□□□□□ -1.92
PTPN12-213ENST00000519553 ANKRD12Q6UB98 2062 aa3.05□□□□□ -1.92
PTPN12-213ENST00000519553 SCN1AP35498 2009 aa3.05□□□□□ -1.92
PTPN12-213ENST00000519553 SLC22A5O76082 557 aa3.05□□□□□ -1.92
PTPN12-213ENST00000519553 SEMA3DO95025 777 aa3.05□□□□□ -1.92
PTPN12-213ENST00000519553 OTX1P32242 354 aaPredicted RBP3.05□□□□□ -1.92
PTPN12-213ENST00000519553 ALKBH6Q3KRA9 238 aa3.05□□□□□ -1.92
PTPN12-213ENST00000519553 NKAIN4Q8IVV8 208 aa3.05□□□□□ -1.92
PTPN12-213ENST00000519553 OR11H7Q8NGC8 314 aa3.05□□□□□ -1.92
PTPN12-213ENST00000519553 ECHDC3Q96DC8 303 aa3.05□□□□□ -1.92
PTPN12-213ENST00000519553 RETNQ9HD89 108 aa3.05□□□□□ -1.92
PTPN12-213ENST00000519553 ZNF233A6NK53 670 aa3.04□□□□□ -1.92
PTPN12-213ENST00000519553 LGALS9O00182 355 aa3.04□□□□□ -1.92
PTPN12-213ENST00000519553 CHST10O43529 356 aa3.04□□□□□ -1.92
PTPN12-213ENST00000519553 IGLV3-25P01717 112 aa3.04□□□□□ -1.92
PTPN12-213ENST00000519553 HLA-DQB1P01920 261 aa3.04□□□□□ -1.92
PTPN12-213ENST00000519553 ZNF688P0C7X2 276 aa3.04□□□□□ -1.92
PTPN12-213ENST00000519553 ME2P23368 584 aa3.04□□□□□ -1.92
PTPN12-213ENST00000519553 OR1E1P30953 314 aa3.04□□□□□ -1.92
PTPN12-213ENST00000519553 RPS23P62266 143 aaKnown RBP3.04□□□□□ -1.92
PTPN12-213ENST00000519553 TGM3Q08188 693 aa3.04□□□□□ -1.92
PTPN12-213ENST00000519553 TRAM2Q15035 370 aa3.04□□□□□ -1.92
PTPN12-213ENST00000519553 PSMD5Q16401 504 aa3.04□□□□□ -1.92
PTPN12-213ENST00000519553 C1orf185Q5T7R7 199 aa3.04□□□□□ -1.92
PTPN12-213ENST00000519553 ADNP2Q6IQ32 1131 aa3.04□□□□□ -1.92
PTPN12-213ENST00000519553 MBOAT2Q6ZWT7 520 aa3.04□□□□□ -1.92
PTPN12-213ENST00000519553 MRPL55Q7Z7F7 128 aaKnown RBP3.04□□□□□ -1.92
PTPN12-213ENST00000519553 TMEM256Q8N2U0 113 aa3.04□□□□□ -1.92
PTPN12-213ENST00000519553 MIR7-3HGQ8N6C7 128 aa3.04□□□□□ -1.92
PTPN12-213ENST00000519553 OR13G1Q8NGZ3 307 aa3.04□□□□□ -1.92
PTPN12-213ENST00000519553 OR5K2Q8NHB8 316 aa3.04□□□□□ -1.92
PTPN12-213ENST00000519553 LYPD6BQ8NI32 183 aa3.04□□□□□ -1.92
PTPN12-213ENST00000519553 RBBP8Q99708 897 aa3.04□□□□□ -1.92
PTPN12-213ENST00000519553 TBL1YQ9BQ87 522 aa3.04□□□□□ -1.92
PTPN12-213ENST00000519553 NMRK1Q9NWW6 199 aa3.04□□□□□ -1.92
PTPN12-213ENST00000519553 TRAV6A0A075B6T7 132 aa3.03□□□□□ -1.92
PTPN12-213ENST00000519553 TRAV19A0A0A6YYK7 116 aa3.03□□□□□ -1.92
PTPN12-213ENST00000519553 A0A0J9YXV3 536 aa3.03□□□□□ -1.92
PTPN12-213ENST00000519553 CENPVL3A0A0U1RRI6 287 aa3.03□□□□□ -1.92
PTPN12-213ENST00000519553 KRBOX1C9JBD0 128 aa3.03□□□□□ -1.92
PTPN12-213ENST00000519553 H7C1H1 209 aa3.03□□□□□ -1.92
PTPN12-213ENST00000519553 WBP4O75554 376 aaKnown RBP3.03□□□□□ -1.92
PTPN12-213ENST00000519553 OR2F2O95006 317 aa3.03□□□□□ -1.92
PTPN12-213ENST00000519553 RPL23P62829 140 aaKnown RBP3.03□□□□□ -1.92
PTPN12-213ENST00000519553 HMGN5P82970 282 aaKnown RBP3.03□□□□□ -1.92
PTPN12-213ENST00000519553 SEMG2Q02383 582 aa3.03□□□□□ -1.92
PTPN12-213ENST00000519553 LIPEQ05469 1076 aa3.03□□□□□ -1.92
PTPN12-213ENST00000519553 IGFBP7Q16270 282 aa3.03□□□□□ -1.92
PTPN12-213ENST00000519553 HSP90AB3PQ58FF7 597 aa3.03□□□□□ -1.92
PTPN12-213ENST00000519553 OR9A2Q8NGT5 310 aa3.03□□□□□ -1.92
PTPN12-213ENST00000519553 TGS1Q96RS0 853 aaKnown RBP3.03□□□□□ -1.92
PTPN12-213ENST00000519553 PLIN2Q99541 437 aa3.03□□□□□ -1.92
PTPN12-213ENST00000519553 C20orf24Q9BUV8 137 aa3.03□□□□□ -1.92
PTPN12-213ENST00000519553 GGTLC1Q9BX51 225 aa3.03□□□□□ -1.92
PTPN12-213ENST00000519553 ZNF160Q9HCG1 818 aa3.03□□□□□ -1.92
PTPN12-213ENST00000519553 COL22A1Q8NFW1 1626 aaPredicted RBP3.03□□□□□ -1.92
PTPN12-213ENST00000519553 IGHV3-72A0A0B4J1Y9 119 aa3.02□□□□□ -1.93
PTPN12-213ENST00000519553 IGHV7-4-1A0A0J9YVY3 117 aa3.02□□□□□ -1.93
PTPN12-213ENST00000519553 PLPP1O14494 284 aa3.02□□□□□ -1.93
PTPN12-213ENST00000519553 CCDC183Q5T5S1 534 aa3.02□□□□□ -1.93
PTPN12-213ENST00000519553 FAM71AQ8IYT1 594 aa3.02□□□□□ -1.93
PTPN12-213ENST00000519553 LRRC52Q8N7C0 313 aa3.02□□□□□ -1.93
PTPN12-213ENST00000519553 SPANXA2-OT1Q8N9U9 137 aa3.02□□□□□ -1.93
PTPN12-213ENST00000519553 ST20-AS1Q8NBB2 130 aa3.02□□□□□ -1.93
PTPN12-213ENST00000519553 TTLQ8NG68 377 aa3.02□□□□□ -1.93
PTPN12-213ENST00000519553 OR4C5Q8NGB2 326 aa3.02□□□□□ -1.93
PTPN12-213ENST00000519553 OR51E1Q8TCB6 317 aa3.02□□□□□ -1.93
PTPN12-213ENST00000519553 RNF145Q96MT1 663 aa3.02□□□□□ -1.93
PTPN12-213ENST00000519553 ZNF317Q96PQ6 595 aaPredicted RBP3.02□□□□□ -1.93
PTPN12-213ENST00000519553 GABRR3A8MPY1 467 aa3.01□□□□□ -1.93
PTPN12-213ENST00000519553 LSM1O15116 133 aaKnown RBP3.01□□□□□ -1.93
PTPN12-213ENST00000519553 GLSO94925 669 aaPredicted RBP3.01□□□□□ -1.93
PTPN12-213ENST00000519553 KRT14P02533 472 aa3.01□□□□□ -1.93
PTPN12-213ENST00000519553 CD37P11049 281 aa3.01□□□□□ -1.93
PTPN12-213ENST00000519553 IL1RNP18510 177 aa3.01□□□□□ -1.93
PTPN12-213ENST00000519553 BCKDHBP21953 392 aa3.01□□□□□ -1.93
PTPN12-213ENST00000519553 RBM34P42696 430 aaKnown RBP3.01□□□□□ -1.93
PTPN12-213ENST00000519553 IDI1Q13907 227 aa3.01□□□□□ -1.93
PTPN12-213ENST00000519553 RBMY1FQ15415 496 aaKnown RBP3.01□□□□□ -1.93
PTPN12-213ENST00000519553 HSDL1Q3SXM5 330 aa3.01□□□□□ -1.93
PTPN12-213ENST00000519553 CARD17Q5XLA6 110 aa3.01□□□□□ -1.93
PTPN12-213ENST00000519553 C12orf54Q6X4T0 127 aa3.01□□□□□ -1.93
PTPN12-213ENST00000519553 NRGNQ92686 78 aa3.01□□□□□ -1.93
PTPN12-213ENST00000519553 NRBF2Q96F24 287 aa3.01□□□□□ -1.93
PTPN12-213ENST00000519553 RSG1Q9BU20 258 aa3.01□□□□□ -1.93
PTPN12-213ENST00000519553 TMEM38AQ9H6F2 299 aa3.01□□□□□ -1.93
PTPN12-213ENST00000519553 EXOSC4Q9NPD3 245 aaKnown RBP3.01□□□□□ -1.93
PTPN12-213ENST00000519553 SLC17A7Q9P2U7 560 aa3.01□□□□□ -1.93
PTPN12-213ENST00000519553 ENOPH1Q9UHY7 261 aa3.01□□□□□ -1.93
PTPN12-213ENST00000519553 NINLQ9Y2I6 1382 aa3□□□□□ -1.93
PTPN12-213ENST00000519553 IGHV1-69DA0A0B4J2H0 117 aa3□□□□□ -1.93
PTPN12-213ENST00000519553 A6NDN8 102 aa3□□□□□ -1.93
PTPN12-213ENST00000519553 PDZK1P1A8MUH7 402 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms