RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 FOXB1Q99853 325 aa5.05□□□□□ -1.6
PABPC1-207ENST00000518716 WACQ9BTA9 647 aa5.05□□□□□ -1.6
PABPC1-207ENST00000518716 PTDSS2Q9BVG9 487 aa5.05□□□□□ -1.6
PABPC1-207ENST00000518716 TPPP3Q9BW30 176 aa5.05□□□□□ -1.6
PABPC1-207ENST00000518716 FAM192AQ9GZU8 254 aa5.05□□□□□ -1.6
PABPC1-207ENST00000518716 SLC38A1Q9H2H9 487 aa5.05□□□□□ -1.6
PABPC1-207ENST00000518716 OR51I1Q9H343 314 aa5.05□□□□□ -1.6
PABPC1-207ENST00000518716 HINT3Q9NQE9 182 aaKnown RBP5.05□□□□□ -1.6
PABPC1-207ENST00000518716 DNAJB9Q9UBS3 223 aa5.05□□□□□ -1.6
PABPC1-207ENST00000518716 MAGEL2Q9UJ55 1249 aa5.05□□□□□ -1.6
PABPC1-207ENST00000518716 PURGQ9UJV8 347 aaKnown RBP5.05□□□□□ -1.6
PABPC1-207ENST00000518716 SPATA2Q9UM82 520 aa5.05□□□□□ -1.6
PABPC1-207ENST00000518716 ERGIC3Q9Y282 383 aa5.05□□□□□ -1.6
PABPC1-207ENST00000518716 WDR45Q9Y484 360 aa5.05□□□□□ -1.6
PABPC1-207ENST00000518716 DNAH1Q9P2D7 4330 aa5.05□□□□□ -1.6
PABPC1-207ENST00000518716 BIRC6Q9NR09 4857 aa5.05□□□□□ -1.6
PABPC1-207ENST00000518716 PLXNB1O43157 2135 aa5.05□□□□□ -1.6
PABPC1-207ENST00000518716 IGHV1-69-2A0A0G2JMI3 117 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 A0A0U1RQV5 110 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 FAM230AA0A1W2PPH8 454 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 CFAP73A6NFT4 308 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 CCDC154A6NI56 674 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 ZSCAN5BA6NJL1 495 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 A8MVM7 634 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 PTGES3LE9PB15 166 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 RNASET2O00584 256 aaKnown RBP5.04□□□□□ -1.6
PABPC1-207ENST00000518716 PLIN3O60664 434 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 CDC14BO60729 498 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 SLC43A1O75387 559 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 MFN2O95140 757 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 NDUFA7O95182 113 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 NGFP01138 241 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 CHRM4P08173 479 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 GSTT2P0CG29 244 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 GSTT2BP0CG30 244 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 PPIAL4GP0DN37 164 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 THRBP10828 461 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 MYL2P10916 166 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 PNMTP11086 282 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 SELLP14151 372 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 SELEP16581 610 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 PRPS1L1P21108 318 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 CALB2P22676 271 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 OMGP23515 440 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 PPP5CP53041 499 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 CLDN17P56750 224 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 ACTR3P61158 418 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 RPS23P62266 143 aaKnown RBP5.04□□□□□ -1.6
PABPC1-207ENST00000518716 CCL8P80075 99 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 LCN2P80188 198 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 COL10A1Q03692 680 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 BNIP2Q12982 314 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 MAB21L1Q13394 359 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 PMS2P3Q13401 168 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 PDCD1Q15116 288 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 MEP1BQ16820 701 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 GSG1Q2KHT4 349 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 ZNF829Q3KNS6 432 aaPredicted RBP5.04□□□□□ -1.6
PABPC1-207ENST00000518716 PCGF3Q3KNV8 242 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 FAM153CQ494X1 144 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 SPDYE7PQ495Y7 208 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 GALNTL6Q49A17 601 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 TMEM255AQ5JRV8 349 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 C6orf136Q5SQH8 315 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 C1orf140Q5VVS0 124 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 TTC33Q6PID6 262 aaPredicted RBP5.04□□□□□ -1.6
PABPC1-207ENST00000518716 C16orf62Q7Z3J2 963 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 HMGN2P46Q86SG4 172 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 C20orf196Q8IYI0 205 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 CLECL1Q8IZS7 167 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 PAQR4Q8N4S7 273 aaPredicted RBP5.04□□□□□ -1.6
PABPC1-207ENST00000518716 KIR3DL3Q8N743 410 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 OR6Q1Q8NGQ2 317 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 MFSD8Q8NHS3 518 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 ADAMTS16Q8TE57 1224 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 XAGE5Q8WWM1 108 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 GTF3AQ92664 365 aaKnown RBP5.04□□□□□ -1.6
PABPC1-207ENST00000518716 LRR1Q96L50 414 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 C3orf30Q96M34 536 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 OXGR1Q96P68 337 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 OR2M2Q96R28 347 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 DUSP26Q9BV47 211 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 SLC5A7Q9GZV3 580 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 KCNN2Q9H2S1 579 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 C19orf12Q9NSK7 152 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 MRPL15Q9P015 296 aaKnown RBP5.04□□□□□ -1.6
PABPC1-207ENST00000518716 NDUFAF4Q9P032 175 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 TAAR3PQ9P1P4 343 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 SEC14L4Q9UDX3 406 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 TESQ9UGI8 421 aaKnown RBP5.04□□□□□ -1.6
PABPC1-207ENST00000518716 DCDC2Q9UHG0 476 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 ZNF346Q9UL40 294 aaKnown RBP5.04□□□□□ -1.6
PABPC1-207ENST00000518716 FZR1Q9UM11 496 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 CHST2Q9Y4C5 530 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 INSIG2Q9Y5U4 225 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 POMT1Q9Y6A1 747 aa5.04□□□□□ -1.6
PABPC1-207ENST00000518716 TRAV34A0A0B4J273 112 aa5.03□□□□□ -1.6
PABPC1-207ENST00000518716 A0A0B4J293 547 aa5.03□□□□□ -1.6
PABPC1-207ENST00000518716 hCG_1809904A0A1W2PP81 198 aa5.03□□□□□ -1.6
PABPC1-207ENST00000518716 A0A1W2PPE2 198 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms