RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 TMCC3Q9ULS5 477 aa12.68□□□□□ -0.38
CSGALNACT1-204ENST00000517494 SNX13Q9Y5W8 968 aa12.68□□□□□ -0.38
CSGALNACT1-204ENST00000517494 CMYA5Q8N3K9 4069 aa12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 NOTCH1P46531 2555 aa12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 FAM220BPB1ANY3 271 aa12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 J3QW42 95 aa12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 SOCS2O14508 198 aa12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 CDC42EP2O14613 210 aa12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 IMPA2O14732 288 aa12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 TOX4O94842 621 aa12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 NDUFA7O95182 113 aa12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 ZNF682O95780 498 aa12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 SELENOWP63302 87 aa12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 HOXA4Q00056 320 aaPredicted RBP12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 PDCD1Q15116 288 aa12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 OCLNQ16625 522 aa12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 ZNF181Q2M3W8 571 aa12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 ZBED5Q49AG3 693 aa12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 PRAMEF6Q5VXH4 476 aa12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 ZNF620Q6ZNG0 422 aa12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 RRM2BQ7LG56 351 aa12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 OR2T12Q8NG77 320 aa12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 STON2Q8WXE9 905 aa12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 ACOT11Q8WXI4 607 aaPredicted RBP12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 FAM71F1Q96KD3 344 aaPredicted RBP12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 RBM4BQ9BQ04 359 aaKnown RBP12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 RNF114Q9Y508 228 aa12.67□□□□□ -0.38
CSGALNACT1-204ENST00000517494 ELOVL7A1L3X0 281 aa12.66□□□□□ -0.38
CSGALNACT1-204ENST00000517494 IQCF6A8MYZ5 107 aa12.66□□□□□ -0.38
CSGALNACT1-204ENST00000517494 AHCYL1O43865 530 aa12.66□□□□□ -0.38
CSGALNACT1-204ENST00000517494 FAM20BO75063 409 aa12.66□□□□□ -0.38
CSGALNACT1-204ENST00000517494 ZNF26P17031 533 aaPredicted RBP12.66□□□□□ -0.38
CSGALNACT1-204ENST00000517494 CFHR2P36980 270 aa12.66□□□□□ -0.38
CSGALNACT1-204ENST00000517494 BPIFB3P59826 476 aa12.66□□□□□ -0.38
CSGALNACT1-204ENST00000517494 KRTAP10-3P60369 221 aa12.66□□□□□ -0.38
CSGALNACT1-204ENST00000517494 LSM6P62312 80 aaKnown RBP12.66□□□□□ -0.38
CSGALNACT1-204ENST00000517494 MEP1BQ16820 701 aa12.66□□□□□ -0.38
CSGALNACT1-204ENST00000517494 SFRP4Q6FHJ7 346 aaPredicted RBP12.66□□□□□ -0.38
CSGALNACT1-204ENST00000517494 CORO6Q6QEF8 472 aa12.66□□□□□ -0.38
CSGALNACT1-204ENST00000517494 MBOAT2Q6ZWT7 520 aa12.66□□□□□ -0.38
CSGALNACT1-204ENST00000517494 RHOUQ7L0Q8 258 aa12.66□□□□□ -0.38
CSGALNACT1-204ENST00000517494 FAM122BQ7Z309 247 aa12.66□□□□□ -0.38
CSGALNACT1-204ENST00000517494 TMEM86BQ8N661 226 aa12.66□□□□□ -0.38
CSGALNACT1-204ENST00000517494 SCCPDHQ8NBX0 429 aa12.66□□□□□ -0.38
CSGALNACT1-204ENST00000517494 SSMEM1Q8WWF3 244 aa12.66□□□□□ -0.38
CSGALNACT1-204ENST00000517494 GATAD2BQ8WXI9 593 aa12.66□□□□□ -0.38
CSGALNACT1-204ENST00000517494 FAM46AQ96IP4 442 aaKnown RBP12.66□□□□□ -0.38
CSGALNACT1-204ENST00000517494 PRDM13Q9H4Q3 707 aa12.66□□□□□ -0.38
CSGALNACT1-204ENST00000517494 RPS6KA6Q9UK32 745 aa12.66□□□□□ -0.38
CSGALNACT1-204ENST00000517494 A0A087WUU8 490 aa12.65□□□□□ -0.38
CSGALNACT1-204ENST00000517494 P2RY10O00398 339 aa12.65□□□□□ -0.38
CSGALNACT1-204ENST00000517494 FFAR1O14842 300 aa12.65□□□□□ -0.38
CSGALNACT1-204ENST00000517494 SDHAP31040 664 aa12.65□□□□□ -0.38
CSGALNACT1-204ENST00000517494 SF3A3Q12874 501 aaKnown RBP eCLIP12.65□□□□□ -0.38
CSGALNACT1-204ENST00000517494 OR8B8Q15620 311 aa12.65□□□□□ -0.38
CSGALNACT1-204ENST00000517494 METTL11BQ5VVY1 283 aa12.65□□□□□ -0.38
CSGALNACT1-204ENST00000517494 PDZD9Q8IXQ8 264 aa12.65□□□□□ -0.38
CSGALNACT1-204ENST00000517494 RNF113BQ8IZP6 322 aaKnown RBP12.65□□□□□ -0.38
CSGALNACT1-204ENST00000517494 GJC3Q8NFK1 279 aa12.65□□□□□ -0.38
CSGALNACT1-204ENST00000517494 TBC1D15Q8TC07 691 aa12.65□□□□□ -0.38
CSGALNACT1-204ENST00000517494 COQ7Q99807 217 aa12.65□□□□□ -0.38
CSGALNACT1-204ENST00000517494 TMEM120AQ9BXJ8 343 aa12.65□□□□□ -0.38
CSGALNACT1-204ENST00000517494 NUAK2Q9H093 628 aa12.65□□□□□ -0.38
CSGALNACT1-204ENST00000517494 HDHD2Q9H0R4 259 aa12.65□□□□□ -0.38
CSGALNACT1-204ENST00000517494 NMNAT1Q9HAN9 279 aaPredicted RBP12.65□□□□□ -0.38
CSGALNACT1-204ENST00000517494 TCF7L1Q9HCS4 588 aa12.65□□□□□ -0.38
CSGALNACT1-204ENST00000517494 ERVK-18Q9QC07 812 aa12.65□□□□□ -0.38
CSGALNACT1-204ENST00000517494 ATPIF1Q9UII2 106 aa12.65□□□□□ -0.38
CSGALNACT1-204ENST00000517494 IER3IP1Q9Y5U9 82 aa12.65□□□□□ -0.38
CSGALNACT1-204ENST00000517494 POMT1Q9Y6A1 747 aa12.65□□□□□ -0.38
CSGALNACT1-204ENST00000517494 CENPVL3A0A0U1RRI6 287 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 LOC100653049A0A140TA62 436 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 ZNF879B4DU55 563 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 C3orf80F5H4A9 247 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 F5H5K5 113 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 GPR137BO60478 399 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 KRT34O76011 436 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 NDUFB2O95178 105 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 TSPAN15O95858 294 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 IGHV4-59P01825 116 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 RAD23AP54725 363 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 MAB21L1Q13394 359 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 MPPED2Q15777 294 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 TAF9Q16594 264 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 METTL21CQ5VZV1 264 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 CD276Q5ZPR3 534 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 ASPHD2Q6ICH7 369 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 ZNF841Q6ZN19 808 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 TMPRSS11FQ6ZWK6 438 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 FKBP9P1Q75LS8 142 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 LINC00346Q8IVM7 164 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 FAM110DQ8TAY7 271 aaPredicted RBP12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 SPRYD4Q8WW59 207 aaPredicted RBP12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 LHX4Q969G2 390 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 SLCO4A1Q96BD0 722 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 TSSK2Q96PF2 358 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 TBX15Q96SF7 602 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 TRIM15Q9C019 465 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 ACOXLQ9NUZ1 547 aa12.64□□□□□ -0.39
CSGALNACT1-204ENST00000517494 GID8Q9NWU2 228 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms