RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 SS18L2Q9UHA2 77 aa-1.03□□□□□ -2.57
SCARNA21.1-201ENST00000515996 RSPH14Q9UHP6 348 aa-1.03□□□□□ -2.57
SCARNA21.1-201ENST00000515996 SMPXQ9UHP9 88 aa-1.03□□□□□ -2.57
SCARNA21.1-201ENST00000515996 CD207Q9UJ71 328 aa-1.03□□□□□ -2.57
SCARNA21.1-201ENST00000515996 CORO1CQ9ULV4 474 aaPredicted RBP-1.03□□□□□ -2.57
SCARNA21.1-201ENST00000515996 A4GNTQ9UNA3 340 aa-1.03□□□□□ -2.57
SCARNA21.1-201ENST00000515996 MRPS2Q9Y399 296 aaKnown RBP-1.03□□□□□ -2.57
SCARNA21.1-201ENST00000515996 MRPS16Q9Y3D3 137 aaKnown RBP-1.03□□□□□ -2.57
SCARNA21.1-201ENST00000515996 TRPV2Q9Y5S1 764 aa-1.03□□□□□ -2.57
SCARNA21.1-201ENST00000515996 LIPGQ9Y5X9 500 aa-1.03□□□□□ -2.57
SCARNA21.1-201ENST00000515996 F11RQ9Y624 299 aaKnown RBP-1.03□□□□□ -2.57
SCARNA21.1-201ENST00000515996 FKBP7Q9Y680 259 aa-1.03□□□□□ -2.57
SCARNA21.1-201ENST00000515996 HLA-DRB4X5D2U9 266 aa-1.03□□□□□ -2.57
SCARNA21.1-201ENST00000515996 SCN7AQ01118 1682 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 ABCC2Q92887 1545 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 UGGT2Q9NYU1 1516 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 PIK3C2GO75747 1445 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 ANKRD30BQ9BXX2 1392 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 PPIAL4EA0A075B759 164 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 TRGV1A0A0A0MS02 117 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 IGLV1-36A0A0B4J1U3 117 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 PPIAL4CA0A0B4J2A2 164 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 IGHV3-38A0A0C4DH36 116 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 CCDC196A0A1B0GTZ2 297 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 A0A1W2PNV4 684 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 A0A1W2PPL8 197 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 IGSF23A1L1A6 192 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 IZUMO1RA6ND01 250 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 OR5K3A6NET4 321 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 OR2W5A6NFC9 320 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 TVP23AA6NH52 213 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 FAM223BA6NKX1 122 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 A8MWP6 167 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 ZNF487B1APH4 448 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 KBTBD13C9JR72 458 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 PPIAL4DF5H284 164 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 SGK494L7N484 410 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 KCNK1O00180 336 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 KPNA3O00505 521 aaPredicted RBP-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 KPNA4O00629 521 aaPredicted RBP-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 FBP2O00757 339 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 APOL1O14791 398 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 PIP5K1BO14986 540 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 PGRMC2O15173 223 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 CLOCKO15516 846 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 ZNF264O43296 627 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 CDC40O60508 579 aaKnown RBP eCLIP-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 NOS1APO75052 506 aaPredicted RBP-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 PSIP1O75475 530 aaKnown RBP-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 SKAP2O75563 359 aaPredicted RBP-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 RPS6KA5O75582 802 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 TPPPO94811 219 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 PSMG1O95456 288 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 NDST3O95803 873 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 ADAP00813 363 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 HLA-HP01893 362 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 MT-ND4P03905 459 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 FHP07954 510 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 PPIAL4FP0DN26 164 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 PPIAL4GP0DN37 164 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 MYBL2P10244 700 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 GLULP15104 373 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 PGAM1P18669 254 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 GGT1P19440 569 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 PKLRP30613 574 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 GNRHRP30968 328 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 SRD5A2P31213 254 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 SOAT1P35610 550 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 CSKP41240 450 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 SLC15A1P46059 708 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 HTR3AP46098 478 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 NPBWR2P48146 333 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 HSPA13P48723 471 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 SLC9A3P48764 834 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 DHPSP49366 369 aaPredicted RBP-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 GMPSP49915 693 aaPredicted RBP-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 PPT1P50897 306 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 BLVRAP53004 296 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 APOC4P55056 127 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 LIM2P55344 173 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 CLDN18P56856 261 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 SLC26A5P58743 744 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 ERVS71-1P61550 626 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 RPS4XP62701 263 aaKnown RBP-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 UBXN2AP68543 259 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 HOXC5Q00444 222 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 FGL1Q08830 312 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 SELPLGQ14242 412 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 PDIA5Q14554 519 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 CCDC38Q502W7 563 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 AGKQ53H12 422 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 FAM209BQ5JX69 171 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 C6orf141Q5SZD1 244 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 SYCP2LQ5T4T6 812 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 C6orf163Q5TEZ5 329 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 ATG16L1Q676U5 607 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 TXNDC8Q6A555 127 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 SIGIRRQ6IA17 410 aa-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 DHRS7BQ6IAN0 325 aaPredicted RBP-1.04□□□□□ -2.58
SCARNA21.1-201ENST00000515996 LAIR2Q6ISS4 152 aa-1.04□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms